RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SLC36A1Q7Z2H8 476 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 TINAGL1Q9GZM7 467 aaPredicted RBP10.15□□□□□ -0.78
HERC1-205ENST00000559886 ZNF286AQ9HBT8 521 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 ING3Q9NXR8 418 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 ANXA10Q9UJ72 324 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 PTPN13Q12923 2485 aa10.15□□□□□ -0.79
HERC1-205ENST00000559886 M0QYG6 137 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 SLC6A1P30531 599 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 TAS2R46P59540 309 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 MEF2DQ14814 521 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 RNASE10Q5GAN6 216 aaKnown RBP10.14□□□□□ -0.79
HERC1-205ENST00000559886 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 OR5AP2Q8NGF4 316 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 RAB1CQ92928 201 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 MARVELD3Q96A59 401 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 TIMD4Q96H15 378 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 MBNL3Q9NUK0 354 aaKnown RBP10.14□□□□□ -0.79
HERC1-205ENST00000559886 KIF25Q9UIL4 384 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 PPIHO43447 177 aaKnown RBP10.14□□□□□ -0.79
HERC1-205ENST00000559886 ADAM20O43506 726 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 IGHV4-39P01824 125 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 PMP2P02689 132 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
HERC1-205ENST00000559886 GLIPR1P48060 266 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 TRIM16LQ309B1 348 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 CHRFAM7AQ494W8 412 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 VAX1Q5SQQ9 334 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 LYPD2Q6UXB3 125 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 MOB1BQ7L9L4 216 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 CENPSQ8N2Z9 138 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 MUC20Q8N307 709 aaPredicted RBP10.14□□□□□ -0.79
HERC1-205ENST00000559886 MINDY2Q8NBR6 621 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 TMEM185AQ8NFB2 350 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 NRGNQ92686 78 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 MCUBQ9NWR8 336 aa10.14□□□□□ -0.79
HERC1-205ENST00000559886 FASNP49327 2511 aaKnown RBP10.14□□□□□ -0.79
HERC1-205ENST00000559886 FAM240BA0A1B0GVZ2 78 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 ZNF735P0CB33 412 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 ERP29P30040 261 aaKnown RBP10.13□□□□□ -0.79
HERC1-205ENST00000559886 AVPI1Q5T686 147 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 DUSP18Q8NEJ0 188 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 OR5H2Q8NGV7 314 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 OR56B4Q8NH76 319 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 CCDC107Q8WV48 283 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 NCOR1P1Q9H4R4 102 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 TRAPPC2LQ9UL33 140 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 MGAT4AQ9UM21 535 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 MEIKINA0A087WXM9 373 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 KIR2DS1A0A191URI9 304 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 FCN3O75636 299 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 GSTT2P0CG29 244 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 PAX1P15863 534 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 SPNP16150 400 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 GIFP27352 417 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 KIR2DS4P43632 304 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 OR3A3P47888 321 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 P2RX3P56373 397 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 ARPC4P59998 168 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 EDDM3AQ14507 147 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 KIR2DS1Q14954 304 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 TMEM155Q4W5P6 130 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 PLA1AQ53H76 456 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 OVCH2Q7RTZ1 564 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 TPRX1Q8N7U7 411 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 ENKURQ8TC29 256 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 SLC6A7Q99884 636 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
HERC1-205ENST00000559886 TRAV39A0A0B4J263 110 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 ODAMA1E959 279 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 AMY2AP04746 511 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 CCR6P51684 374 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 KRTAP10-9P60411 292 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 CDK10Q15131 360 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 CCBE1Q6UXH8 406 aaPredicted RBP10.12□□□□□ -0.79
HERC1-205ENST00000559886 ZNF782Q6ZMW2 699 aaPredicted RBP10.12□□□□□ -0.79
HERC1-205ENST00000559886 OR51S1Q8NGJ8 323 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 SLC25A10Q9UBX3 287 aaPredicted RBP10.12□□□□□ -0.79
HERC1-205ENST00000559886 FUOMA2VDF0 154 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 CEACAM18A8MTB9 384 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 FABP7O15540 132 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 NDUFB3O43676 98 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 CARTPTQ16568 116 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 CR1LQ2VPA4 569 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 ARRDC1Q8N5I2 433 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 ZNF525Q8N782 197 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 DPAGT1Q9H3H5 408 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 NECAP2Q9NVZ3 263 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 SLC2A8Q9NY64 477 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 EHFQ9NZC4 300 aa10.12□□□□□ -0.79
HERC1-205ENST00000559886 DISC1C4P0D8 188 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 SDCBPO00560 298 aaPredicted RBP10.11□□□□□ -0.79
HERC1-205ENST00000559886 DVL1O14640 695 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 IFNA6P05013 189 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 SCTP09683 121 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 GPR6P46095 362 aaPredicted RBP10.11□□□□□ -0.79
HERC1-205ENST00000559886 EDDM3BP56851 147 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 HMGN3Q15651 99 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms