RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 IGKV1-6A0A0C4DH72 117 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 GLAP06280 429 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 MUC1P15941 1255 aaPredicted RBP14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 CHRFAM7AQ494W8 412 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 HIST2H2BCQ6DN03 193 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF880Q6PDB4 577 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF788Q6ZQV5 615 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 IDO2Q6ZQW0 420 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 OR5H2Q8NGV7 314 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 SDSLQ96GA7 329 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 BEX2Q9BXY8 128 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 TMPRSS13Q9BYE2 586 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 C20orf85Q9H1P6 137 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 BEX1Q9HBH7 125 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 CTSZQ9UBR2 303 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 POLQO75417 2590 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 NAP1L6A6NFF2 107 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 DAOP14920 347 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 FAUP35544 74 aaKnown RBP14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 CARTPTQ16568 116 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 FAM53AQ6NSI3 398 aaPredicted RBP14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 PLET1Q6UQ28 207 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 C1orf87Q8N0U7 546 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 TMEM185AQ8NFB2 350 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 TMEM246Q9BRR3 403 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF286AQ9HBT8 521 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 K7N7A8 449 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 TNFRSF13BO14836 293 aaPredicted RBP14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 TMPRSS2O15393 492 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 TK1P04183 234 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 MDH2P40926 338 aaKnown RBP14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 ARPC4P59998 168 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 BTG1P62324 171 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 KRBOX4Q5JUW0 171 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 VAX1Q5SQQ9 334 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 OVCH2Q7RTZ1 564 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 PRR18Q8N4B5 295 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 OR13A1Q8NGR1 328 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 GINS4Q9BRT9 223 aa14.42□□□□□ -0.1
CHRNA3-206ENST00000559658 ABCA12Q86UK0 2595 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 TRBV6-6A0A0A6YYG2 114 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 OVOL3O00110 214 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 ARPC1BO15143 372 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 NDUFB6O95139 128 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 MEF2DQ14814 521 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 CDK10Q15131 360 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 MRGPRDQ8TDS7 321 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 TRAPPC2LQ9UL33 140 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 EDARQ9UNE0 448 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 PTPN13Q12923 2485 aa14.41□□□□□ -0.1
CHRNA3-206ENST00000559658 MEIKINA0A087WXM9 373 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 TRAV38-1A0A0B4J264 116 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 TMEM30CPA0ZSE6 113 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 SIGLEC5O15389 551 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 FABP7O15540 132 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 IGHV2-70P01814 119 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 TAS2R46P59540 309 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF660Q6AZW8 331 aaPredicted RBP14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 TCF23Q7RTU1 214 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF561Q8N587 486 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 DEDD2Q8WXF8 326 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 SNX22Q96L94 193 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 MARVELD1Q9BSK0 173 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF665Q9H7R5 613 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 H3BUI4 141 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 GOSR1O95249 250 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 OR5H8P0DN80 308 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 TBPP20226 339 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 SSTR5P35346 364 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 OR3A3P47888 321 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 KRTAP10-9P60411 292 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 HLA-DRB3P79483 266 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 AADACL3Q5VUY0 350 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 SLC35E4Q6ICL7 350 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 BTN2A1Q7KYR7 527 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 KIRREL1Q96J84 757 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 SEBOXQ9HB31 216 aaPredicted RBP14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 MBNL3Q9NUK0 354 aaKnown RBP14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 VSIG4Q9Y279 399 aa14.4□□□□□ -0.1
CHRNA3-206ENST00000559658 OR5H14A6NHG9 310 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 TRDCB7Z8K6 153 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 DISC1C4P0D8 188 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 INMT-MINDY4F8WBC2 141 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 BET1O15155 118 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 ADAM20O43506 726 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 ANXA7P20073 488 aaKnown RBP14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 NFYAP23511 347 aaPredicted RBP14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 NPY4RP50391 375 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 EDDM3BP56851 147 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 SEC61A1P61619 476 aaKnown RBP14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 IL13RA1P78552 427 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 BAMBIQ13145 260 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 RBMS2Q15434 407 aaKnown RBP14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 ACTBL2Q562R1 376 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 Q6ZS49 121 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 NEU4Q8WWR8 484 aaPredicted RBP14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 CREB3L1Q96BA8 519 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 CCL19Q99731 98 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 SLC2A8Q9NY64 477 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 OR1A1Q9P1Q5 309 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms