RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ELOVL3Q9HB03 270 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 CRLF2Q9HC73 371 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.98□□□□□ -1.61
USP3-212ENST00000559276 KCNG2Q9UJ96 466 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 VSIG4Q9Y279 399 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 PKD1L1Q8TDX9 2849 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 MEX3AA1L020 520 aaKnown RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 C5orf51A6NDU8 294 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 PCP4L1A6NKN8 68 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 ZNF705EA8MWA4 302 aaPredicted RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 FAM157AC9JC47 383 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 M0QYG6 137 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 RAB27BO00194 218 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 PSMD9O00233 223 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 WRBO00258 174 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 FBXO24O75426 580 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 SRSF10O75494 262 aaKnown RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 VENTXO95231 258 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 AHSA1O95433 338 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 SFT2D2O95562 160 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 CST4P01036 141 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 AVPP01185 164 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 BGLAPP02818 100 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 CSTBP04080 98 aaKnown RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 CRYBA1P05813 215 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 S100A6P06703 90 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 PGAM2P15259 253 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 ZNF43P17038 809 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 FPR2P25090 351 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 ARR3P36575 388 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 SULT1A2P50226 295 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 RAB5CP51148 216 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 DAP3P51398 398 aaKnown RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 CD81P60033 236 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 LMO4P61968 165 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 RAB1AP62820 205 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 POU3F1Q03052 451 aaPredicted RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 ZP4Q12836 540 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 MELKQ14680 651 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 RHEBQ15382 184 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 SGCAQ16586 387 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 FAM76BQ5HYJ3 339 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 DNLZQ5SXM8 178 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 ZNF529Q6P280 563 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 H1FNTQ75WM6 255 aaPredicted RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 TRAPPC6BQ86SZ2 158 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 PEG10Q86TG7 708 aaKnown RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 CBLN2Q8IUK8 224 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 PAQR4Q8N4S7 273 aaPredicted RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 LINC00469Q8N7U9 141 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 LINC01356Q8N9X3 169 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 CCDC54Q8NEL0 328 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 LFNGQ8NES3 379 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 OR51A4Q8NGJ6 313 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 OR13C3Q8NGS6 347 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 OR10AC1Q8NH08 325 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 TERB2Q8NHR7 220 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 CLDND2Q8NHS1 167 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 FGFBP3Q8TAT2 258 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 NEU4Q8WWR8 484 aaPredicted RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 MRPL24Q96A35 216 aaKnown RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 C2orf50Q96LR7 162 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 MOGAT1Q96PD6 335 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 EMC6Q9BV81 110 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 RAB1BQ9H0U4 201 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 TLNRD1Q9H1K6 362 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 OR51M1Q9H341 326 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 SEBOXQ9HB31 216 aaPredicted RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 RHOFQ9HBH0 211 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 TREM1Q9NP99 234 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 CYTL1Q9NRR1 136 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 MED29Q9NX70 200 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 TAS2R4Q9NYW5 299 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 GHRLQ9UBU3 117 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 ZNF346Q9UL40 294 aaKnown RBP4.97□□□□□ -1.61
USP3-212ENST00000559276 B9D1Q9UPM9 204 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 RHBDD3Q9Y3P4 386 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 TIMM10BQ9Y5J6 103 aa4.97□□□□□ -1.61
USP3-212ENST00000559276 A0A1B0GW64 132 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 LOC107986453A0A1B0GWG9 222 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 TMEM235A6NFC5 223 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 C5orf52A6NGY3 159 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 COLCA2A8K830 154 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 TMEM14DPA8MWL7 114 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 RNASEK-C17orf49H0YIS7 233 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 DCTN6O00399 190 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 WIPF1O43516 503 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 TCF21O43680 179 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 HLA-DQA2P01906 255 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 F13BP05160 661 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 FABP1P07148 127 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 SPARCP09486 303 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 PATE4P0C8F1 98 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 HKR1P10072 659 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 SPP1P10451 314 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 ZNF823P16415 610 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 RCC1P18754 421 aaPredicted RBP4.96□□□□□ -1.62
USP3-212ENST00000559276 HNF1AP20823 631 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 MAS1LP35410 378 aa4.96□□□□□ -1.62
USP3-212ENST00000559276 GLP1RP43220 463 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms