RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GATA3P23771 443 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 BLVRBP30043 206 aaPredicted RBP8.91□□□□□ -0.98
TPM1-217ENST00000559108 BLMHQ13867 455 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 C11orf91Q3C1V1 193 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 PRAMEF5Q5TYX0 476 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 METTL11BQ5VVY1 283 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 BTNL3Q6UXE8 466 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 BRD3OSQ6XYD6 125 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 ZNF782Q6ZMW2 699 aaPredicted RBP8.91□□□□□ -0.98
TPM1-217ENST00000559108 PIP4P2Q8N4L2 257 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 KIR3DL3Q8N743 410 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 DTX3Q8N9I9 347 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 MRPL30Q8TCC3 161 aaKnown RBP8.91□□□□□ -0.98
TPM1-217ENST00000559108 MRGPRDQ8TDS7 321 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 CCDC107Q8WV48 283 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 C17orf50Q8WW18 174 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 C22orf15Q8WYQ4 148 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 AJUBAQ96IF1 538 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 PECRQ9BY49 303 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 ZMAT3Q9HA38 289 aaKnown RBP8.91□□□□□ -0.98
TPM1-217ENST00000559108 GLS2Q9UI32 602 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 AK3Q9UIJ7 227 aa8.91□□□□□ -0.98
TPM1-217ENST00000559108 MEIKINA0A087WXM9 373 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 A0A1W2PRD5 423 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 A0A1W2PRF3 423 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 A0A1W2PRM7 423 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 FAM172BPA6NC97 362 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 C15orf65H3BRN8 121 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 MFNGO00587 321 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 NAPSAO96009 420 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 ZNF728P0DKX0 622 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 PTHLHP12272 177 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 RCC1P18754 421 aaPredicted RBP8.9□□□□□ -0.98
TPM1-217ENST00000559108 FUT3P21217 361 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 PAX6P26367 422 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 SSTR5P35346 364 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 TMBIM6P55061 237 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 MEF2CQ06413 473 aaPredicted RBP8.9□□□□□ -0.98
TPM1-217ENST00000559108 SLC35E4Q6ICL7 350 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 OR5D13Q8NGL4 314 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 OR4K15Q8NH41 348 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 DYNC2LI1Q8TCX1 351 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 CORO2AQ92828 525 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 LHX4Q969G2 390 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 ZNF48Q96MX3 618 aaPredicted RBP8.9□□□□□ -0.98
TPM1-217ENST00000559108 RHBDL2Q9NX52 303 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 ZNRD1Q9P1U0 126 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 ZNF69Q9UC07 566 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 RAB22AQ9UL26 194 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 KPTNQ9Y664 436 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 LINC00312Q9Y6C7 94 aa8.9□□□□□ -0.98
TPM1-217ENST00000559108 hADV38S2A0JD32 116 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 C12orf77C9JDV5 145 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 M0R1W7 72 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 EIF4EP06730 217 aaKnown RBP8.89□□□□□ -0.99
TPM1-217ENST00000559108 GNB3P16520 340 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 GLP1RP43220 463 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 SRSF2Q01130 221 aaKnown RBP8.89□□□□□ -0.99
TPM1-217ENST00000559108 USP43Q70EL4 1123 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 IZUMO1Q8IYV9 350 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 CMTM4Q8IZR5 234 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 OR10R2Q8NGX6 335 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 NEK7Q8TDX7 302 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 RAB2BQ8WUD1 216 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 PTX4Q96A99 478 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 ZNF714Q96N38 554 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 ATG5Q9H1Y0 275 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 MIXL1Q9H2W2 232 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 UNKLQ9H9P5 680 aaKnown RBP8.89□□□□□ -0.99
TPM1-217ENST00000559108 PCDHB16Q9NRJ7 776 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 ETAA1Q9NY74 926 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 CALYQ9NYX4 217 aa8.89□□□□□ -0.99
TPM1-217ENST00000559108 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
TPM1-217ENST00000559108 A0A075B6Q4 140 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 IGKV1D-8A0A087WSZ0 117 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 TMEM30CPA0ZSE6 113 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 DPPA5A6NC42 116 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 MCRIP1C9JLW8 97 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 NPIPB11E5RHQ5 1161 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 SSX5O60225 188 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 HPGDSO60760 199 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 CLPXO76031 633 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 IGHV1-8P0DP01 117 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 HIST1H1DP16402 221 aaKnown RBP8.88□□□□□ -0.99
TPM1-217ENST00000559108 PRTN3P24158 256 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 COX7A1P24310 79 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 KCNJ3P48549 501 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 MADCAM1Q13477 382 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 ZNF880Q6PDB4 577 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 TRAPPC6BQ86SZ2 158 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 DYNAPQ8N1N2 210 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 SAMD12Q8N8I0 201 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 OR1L1Q8NH94 360 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 RFESDQ8TAC1 157 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 PPP1R35Q8TAP8 253 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 GCDHQ92947 438 aaPredicted RBP8.88□□□□□ -0.99
TPM1-217ENST00000559108 LEAP2Q969E1 77 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 KIRREL1Q96J84 757 aa8.88□□□□□ -0.99
TPM1-217ENST00000559108 DMRTB1Q96MA1 342 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms