RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TEX13DA0A0J9YY54 714 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 A0A1B0GWJ7 208 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 C5orf49A4QMS7 147 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 F5H0A9 414 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 SDCBPO00560 298 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 SMPD2O60906 423 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 PDCD6O75340 191 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 CD3EP07766 207 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 FCGR3AP08637 254 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 TPT1P13693 172 aaKnown RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 RAC2P15153 192 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ZNF250P15622 560 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 SELEP16581 610 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ZP3P21754 424 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 CHATP28329 748 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 LUMP51884 338 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 EIF5AP63241 154 aaKnown RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ZNF92Q03936 586 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 TLE4Q04727 773 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 BSPH1Q075Z2 132 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 BAMBIQ13145 260 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 SMCO1Q147U7 214 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 EFNB3Q15768 340 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 TAF9Q16594 264 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ABCA11PQ4W5N1 156 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ZNF660Q6AZW8 331 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 OVCH2Q7RTZ1 564 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ZDHHC23Q8IYP9 409 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 LILRB1Q8NHL6 650 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 SUN5Q8TC36 379 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 IGFBPL1Q8WX77 278 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 MAFIPQ8WZ33 124 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 TMEM230Q96A57 120 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 C2orf50Q96LR7 162 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ZNF2Q9BSG1 426 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 PAPOLGQ9BWT3 736 aaKnown RBP6.53□□□□□ -1.36
LRRC28-211ENST00000558890 FN3KRPQ9HA64 309 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 C12orf4Q9NQ89 552 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 C1orf123Q9NWV4 160 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 AK3Q9UIJ7 227 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 GPR160Q9UJ42 338 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 RNF115Q9Y4L5 304 aa6.53□□□□□ -1.36
LRRC28-211ENST00000558890 ZFHX3Q15911 3703 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 F8P00451 2351 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 HEATR1Q9H583 2144 aaKnown RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A10PA6NDY2 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A18PA6NE21 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A16PA6NEW6 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 DPRXA6NFQ7 191 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 MFSD2BA6NFX1 497 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A20PA6NIJ5 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A8PA6NJQ4 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A7PA6NKC0 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 POM121CA8CG34 1229 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 ZNF850A8MQ14 1090 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A22PA8MWA6 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A12PA8MX19 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A5PA8MXJ8 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A23PA8MXZ1 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 KRBOX1C9JBD0 128 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 M0R1B8 84 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 ABCD4O14678 606 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 TPD52L2O43399 206 aaKnown RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 F12P00748 615 aaPredicted RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 IFNA2P01563 188 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 IFNA21P01568 189 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 IGHV3-13P01766 116 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 RLN2P04090 185 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 ADH4P08319 380 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A15PP0C7V4 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A13PP0C7W8 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A14PP0C7W9 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAM90A24PP0C7X0 464 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 ZNF728P0DKX0 622 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 OR5H8P0DN80 308 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 PI3P19957 117 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 KITLGP21583 273 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 CCNOP22674 350 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 PMELP40967 661 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 ZNF83P51522 516 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 RBM11P57052 281 aaKnown RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 SELENOVP59797 346 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 HERV-K104P61576 105 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 PDZK1IP1Q13113 114 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 AADACL3Q5VUY0 350 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 RGS7BPQ6MZT1 257 aaPredicted RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 PRSS54Q6PEW0 395 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 HSD17B13Q7Z5P4 300 aaPredicted RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 WFDC8Q8IUA0 241 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 SAXO1Q8IYX7 474 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FBXL14Q8N1E6 418 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 ZNF611Q8N823 705 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 OR56B2PQ8NGI1 322 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 OR51F2Q8NH61 342 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 MARS2Q96GW9 593 aaKnown RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 LURAP1Q96LR2 239 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms