RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PEX16Q9Y5Y5 336 aa12.91□□□□□ -0.34
RABGGTA-206ENST00000558649 V9GY05 133 aa12.91□□□□□ -0.34
RABGGTA-206ENST00000558649 A0A087WXM4 84 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 TRAV1-2A0A0B4J238 106 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 UBE2QL1A1L167 161 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 ZNF729A6NN14 1252 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 NFYBP25208 207 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 UNC119Q13432 240 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 LTC4SQ16873 150 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 PLA1AQ53H76 456 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 SYT6Q5T7P8 510 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 LHFPL4Q7Z7J7 247 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 OR51D1Q8NGF3 324 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 SSMEM1Q8WWF3 244 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 CHCHD6Q9BRQ6 235 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 NICN1Q9BSH3 213 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 PRDM13Q9H4Q3 707 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 ZMAT3Q9HA38 289 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 VCX3AQ9NNX9 186 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 TXNL4BQ9NX01 149 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 ETAA1Q9NY74 926 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 CALYQ9NYX4 217 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 ZNRD1Q9P1U0 126 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 RCC2Q9P258 522 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 SSR3Q9UNL2 185 aa12.9□□□□□ -0.34
RABGGTA-206ENST00000558649 IGHV2-26A0A0B4J1V2 119 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 LOC100506127A0A0U1RQW1 187 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A10PA6NDY2 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A18PA6NE21 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A16PA6NEW6 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A20PA6NIJ5 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A8PA6NJQ4 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A22PA8MWA6 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A12PA8MX19 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A5PA8MXJ8 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 AIPO00170 330 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A15PP0C7V4 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A13PP0C7W8 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A14PP0C7W9 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM90A24PP0C7X0 464 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 CD36P16671 472 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 RAB3BP20337 219 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 FUT3P21217 361 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 GALP22466 123 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 GADD45AP24522 165 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 SSTR5P35346 364 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 RBM39Q14498 530 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 C17orf58Q2M2W7 97 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 SIGIRRQ6IA17 410 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 SLC35E4Q6ICL7 350 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 LDLRAD3Q86YD5 345 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 RFESDQ8TAC1 157 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 UBALD1Q8TB05 177 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 TAF15Q92804 592 aaKnown RBP eCLIP12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 NEDD4LQ96PU5 975 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 CLEC7AQ9BXN2 247 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 CHIAQ9BZP6 476 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 STEAP1Q9UHE8 339 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
RABGGTA-206ENST00000558649 ATRQ13535 2644 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 KBTBD11-OT1A0A1B0GTJ5 212 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 BTBD17A6NE02 478 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 TMEM14DPA8MWL7 114 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 ODF3BA8MYP8 253 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 CLDN34H7C241 214 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 PDCD6O75340 191 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 CD37P11049 281 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 IER3P46695 156 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 PSMD7P51665 324 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 QRFPP83859 136 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 ZNF626Q68DY1 528 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 OR52W1Q6IF63 320 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 ZNF497Q6ZNH5 498 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 OR11H6Q8NGC7 330 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 OR4K15Q8NH41 348 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 GCDHQ92947 438 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 FAM3DQ96BQ1 224 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 DPAGT1Q9H3H5 408 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 ZNF696Q9H7X3 374 aa12.88□□□□□ -0.35
RABGGTA-206ENST00000558649 IL1AP01583 271 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 IGHV3-7P01780 117 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 FGF9P31371 208 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 PAX5Q02548 391 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 OR2W3Q7Z3T1 314 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 C6orf201Q7Z4U5 140 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 ABHD12Q8N2K0 398 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 BEND2Q8NDZ0 799 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 LEAP2Q969E1 77 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 AJUBAQ96IF1 538 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 KIRREL1Q96J84 757 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 URM1Q9BTM9 101 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
RABGGTA-206ENST00000558649 RNF167Q9H6Y7 350 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms