RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CKLFQ9UBR5 152 aa9.55□□□□□ -0.88
HERC1-202ENST00000558324 TRAV8-7A0A075B6U6 113 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 A0A087X0M5 115 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 TRBV5-5A0A0J9YX44 114 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 A0A1B0GX30 115 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 ALDOBP05062 364 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 C21orf33P30042 268 aaPredicted RBP9.54□□□□□ -0.88
HERC1-202ENST00000558324 Q499Y3 187 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 ABCA11PQ4W5N1 156 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 YIF1BQ5BJH7 314 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 ATAD3CQ5T2N8 411 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 ASCL4Q6XD76 172 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 STX19Q8N4C7 294 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 BPIFB6Q8NFQ5 453 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 UBALD1Q8TB05 177 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 NEK7Q8TDX7 302 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 TOMM40LQ969M1 308 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 RPEQ96AT9 228 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 CREB3L1Q96BA8 519 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 AKR1E2Q96JD6 320 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 PGLYRP3Q96LB9 341 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 MMP28Q9H239 520 aa9.54□□□□□ -0.88
HERC1-202ENST00000558324 VWFP04275 2813 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 A0A1W2PPE3 182 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 A0A1W2PRX2 142 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 EFCAB10A6NFE3 127 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 G3V4G9 280 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 MYL12BO14950 172 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 OPN1MWP04001 364 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 LPLP06858 475 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 OPN1MW2P0DN77 364 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 OPN1MW3P0DN78 364 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 CGB3P0DN86 165 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 CGB7P0DN87 165 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 IGFBP3P17936 291 aaPredicted RBP9.53□□□□□ -0.88
HERC1-202ENST00000558324 MNDAP41218 407 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 KCNJ3P48549 501 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 RPS11P62280 158 aaKnown RBP eCLIP9.53□□□□□ -0.88
HERC1-202ENST00000558324 DOC2BQ14184 412 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 C9orf152Q5JTZ5 239 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 OGFRL1Q5TC84 451 aaPredicted RBP9.53□□□□□ -0.88
HERC1-202ENST00000558324 LAIR2Q6ISS4 152 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 CCDC144NLQ6NUI1 221 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 JAGN1Q8N5M9 183 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 ZNF485Q8NCK3 441 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 Q8NFD4 153 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 OR56B4Q8NH76 319 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 CCDC107Q8WV48 283 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 MUL1Q969V5 352 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 R3HDM4Q96D70 268 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 WNT10AQ9GZT5 417 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 LIN7BQ9HAP6 207 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 PAK1IP1Q9NWT1 392 aaPredicted RBP9.53□□□□□ -0.88
HERC1-202ENST00000558324 IL36GQ9NZH8 169 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 PSG11Q9UQ72 335 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 MRPS28Q9Y2Q9 187 aaKnown RBP9.53□□□□□ -0.88
HERC1-202ENST00000558324 AMMECR1Q9Y4X0 333 aaPredicted RBP9.53□□□□□ -0.88
HERC1-202ENST00000558324 HSPE1-MOB4S4R3N1 261 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 WNK1Q9H4A3 2382 aa9.53□□□□□ -0.88
HERC1-202ENST00000558324 TMEM30CPA0ZSE6 113 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 LY6LH3BQJ8 138 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 J3QR06 171 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 OR2F2O95006 317 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 MAS1P04201 325 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 GTF2F2P13984 249 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 CELP19835 753 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 FSTP19883 344 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 TAS2R43P59537 309 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 DIAPH2-AS1Q14236 149 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 NHLRC3Q5JS37 347 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 AWAT2Q6E213 333 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 C16orf82Q7Z2V1 217 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 NDUFA11Q86Y39 141 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 OR5AU1Q8NGC0 362 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 OR10X1Q8NGY0 326 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 WIPF2Q8TF74 440 aaPredicted RBP9.52□□□□□ -0.89
HERC1-202ENST00000558324 RBM14Q96PK6 669 aaKnown RBP9.52□□□□□ -0.89
HERC1-202ENST00000558324 OCSTAMPQ9BR26 566 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 CNOT2Q9NZN8 540 aaKnown RBP9.52□□□□□ -0.89
HERC1-202ENST00000558324 PSORS1C1Q9UIG5 152 aa9.52□□□□□ -0.89
HERC1-202ENST00000558324 TRBV5-7A0A0A0MS05 114 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 ADARB2-AS1A8MUL3 147 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 OOSP1A8MZH6 123 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 NPIPB11E5RHQ5 1161 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 CASQ2O14958 399 aaPredicted RBP9.51□□□□□ -0.89
HERC1-202ENST00000558324 ZNF780AO75290 641 aaPredicted RBP9.51□□□□□ -0.89
HERC1-202ENST00000558324 SNRNP70P08621 437 aaKnown RBP9.51□□□□□ -0.89
HERC1-202ENST00000558324 FAM106CPP0CH98 169 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 WNT4P56705 351 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 PAX5Q02548 391 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 MADCAM1Q13477 382 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 HES1Q14469 280 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 MPV17LQ2QL34 196 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 KHDC1LQ5JSQ8 128 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 GLIPR1L1Q6UWM5 242 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 CENPVQ7Z7K6 275 aaPredicted RBP9.51□□□□□ -0.89
HERC1-202ENST00000558324 LINC00596Q86U02 117 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 DRAM1Q8N682 238 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 DERL3Q96Q80 235 aa9.51□□□□□ -0.89
HERC1-202ENST00000558324 VCXQ9H320 206 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms