RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 C17orf78Q8N4C9 275 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 FAM169BQ8N8A8 192 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 OR5D13Q8NGL4 314 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 OR1S2Q8NGQ3 325 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 OR10J5Q8NHC4 309 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 LYPD6BQ8NI32 183 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 FAM216AQ8WUB2 273 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 SARAFQ96BY9 339 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 GINS3Q9BRX5 216 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 HES7Q9BYE0 225 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 LIME1Q9H400 295 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 CDH20Q9HBT6 801 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 LUZP4Q9P127 313 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 CLCF1Q9UBD9 225 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 AMDHD2Q9Y303 409 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 NCOA6Q14686 2063 aaPredicted RBP7.11□□□□□ -1.27
SPG11-209ENST00000558253 TRIOO75962 3097 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 SDK1Q7Z5N4 2213 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 TNRC18O15417 2968 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 MSGN1A6NI15 193 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 ARGFXA6NJG6 315 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 RNF212BA8MTL3 300 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 IQCF6A8MYZ5 107 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 UMAD1C9J7I0 102 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 WRBO00258 174 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 SH2D1BO14796 132 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 HSPA12AO43301 675 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 ZNF14P17017 642 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 UCP1P25874 307 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 PEA15Q15121 130 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 PHLDA2Q53GA4 152 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 HAGHLQ6PII5 290 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 Q6ZT83 130 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 FAM214BQ7L5A3 538 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 LYZL2Q7Z4W2 148 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 MDP1Q86V88 176 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 GAPTQ8N292 157 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 SUMF2Q8NBJ7 301 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 ZBTB34Q8NCN2 500 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 BHLHE23Q8NDY6 225 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 LFNGQ8NES3 379 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 OR8G5Q8NG78 346 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 OR4D5Q8NGN0 318 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 NEK7Q8TDX7 302 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 LRRC46Q96FV0 321 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 NARS2Q96I59 477 aaKnown RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 TSNAXQ99598 290 aaKnown RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 SPOCK3Q9BQ16 436 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 CABLES2Q9BTV7 478 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 NKX6-2Q9C056 277 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 DEFB127Q9H1M4 99 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 SAV1Q9H4B6 383 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 ZNF552Q9H707 407 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 PLEKHF2Q9H8W4 249 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 SEBOXQ9HB31 216 aaPredicted RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 FBXL17Q9UF56 701 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 OR2W1Q9Y3N9 320 aa7.1□□□□□ -1.27
SPG11-209ENST00000558253 LSM5Q9Y4Y9 91 aaKnown RBP7.1□□□□□ -1.27
SPG11-209ENST00000558253 KMT2EQ8IZD2 1858 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 PCSK5Q92824 1860 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 A0A1B0GU03 582 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 A0A1B0GW64 132 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 BTBD17A6NE02 478 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 MED6O75586 246 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 NGFP01138 241 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 DANCRP0C864 163 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 SPP1P10451 314 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 HOXC12P31275 282 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 WNT5AP41221 380 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 NKX2-1P43699 371 aaPredicted RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 DVL1P1P54792 670 aaPredicted RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 UCP2P55851 309 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 PPP1CBP62140 327 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 VAMP2P63027 116 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 HLA-DRB3P79483 266 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 DEFA5Q01523 94 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 ID3Q02535 119 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 DAZAP2Q15038 168 aaPredicted RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 ZNF146Q15072 292 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 P2RY6Q15077 328 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 GUSBP1Q15486 140 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 RSPO4Q2I0M5 234 aaPredicted RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 C9orf135Q5VTT2 229 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 RPL7L1Q6DKI1 246 aaKnown RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 BTNL8Q6UX41 500 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 DPPA3Q6W0C5 159 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 TBC1D26Q86UD7 250 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 H1FOOQ8IZA3 346 aaPredicted RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 SELENOHQ8IZQ5 122 aaKnown RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 OR2C3Q8N628 320 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 TCTEX1D1Q8N7M0 179 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 MRPL30Q8TCC3 161 aaKnown RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 GNPNAT1Q96EK6 184 aaPredicted RBP7.09□□□□□ -1.27
SPG11-209ENST00000558253 ZNF251Q9BRH9 671 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 PBDC1Q9BVG4 233 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 BCL2L14Q9BZR8 327 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 OR2S2Q9NQN1 319 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 UQCC1Q9NVA1 299 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 COA4Q9NYJ1 87 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms