RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 HABP2Q14520 560 aaPredicted RBP13.42□□□□□ -0.26
NEDD4-212ENST00000557845 HLA-DRB5Q30154 266 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 SLC22A6Q4U2R8 563 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 C6orf141Q5SZD1 244 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 RNLSQ5VYX0 342 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 Q6ZTK2 550 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 LINC00596Q86U02 117 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 Q8N2B8 174 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 KLHDC1Q8N7A1 406 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 NRG4Q8WWG1 115 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 CREB3L1Q96BA8 519 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 DERL3Q96Q80 235 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 LINC00574Q9H8X3 128 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 CALYQ9NYX4 217 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 IDI2-AS1Q9NZ38 188 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 CMYA5Q8N3K9 4069 aa13.42□□□□□ -0.26
NEDD4-212ENST00000557845 NPIPB11E5RHQ5 1161 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 LY6LH3BQJ8 138 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 PIN1P1O15428 100 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 MAS1P04201 325 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 VSIG10L2P0DP72 767 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 BRS3P32247 399 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 CEACAM3P40198 252 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 BLCAPP62952 87 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 MPV17LQ2QL34 196 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 CDH26Q8IXH8 852 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 JAGN1Q8N5M9 183 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 OR9G1Q8NH87 305 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 MRGPRDQ8TDS7 321 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 CFHR4Q92496 578 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 MUL1Q969V5 352 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 PRSS22Q9GZN4 317 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 SERTAD4Q9NUC0 356 aa13.41□□□□□ -0.26
NEDD4-212ENST00000557845 TRAV39A0A0B4J263 110 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 TSPAN15O95858 294 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 IL1AP01583 271 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 GZMHP20718 246 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 CD24P25063 80 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 AQP4P55087 323 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 ATAD3CQ5T2N8 411 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 TPTE2P1Q5T6R2 138 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 GLIPR1L1Q6UWM5 242 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 Q6ZS46 218 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 LYPD6Q86Y78 171 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 OR10A7Q8NGE5 316 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 RFESDQ8TAC1 157 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 THRSPQ92748 146 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 MYDGFQ969H8 173 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 MND1Q9BWT6 205 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 SCN3BQ9NY72 215 aa13.4□□□□□ -0.26
NEDD4-212ENST00000557845 MRPS28Q9Y2Q9 187 aaKnown RBP13.4□□□□□ -0.26
NEDD4-212ENST00000557845 J3QR06 171 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 MAPK3P27361 379 aaPredicted RBP13.39□□□□□ -0.27
NEDD4-212ENST00000557845 ARHGDIBP52566 201 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 RBM39Q14498 530 aaKnown RBP13.39□□□□□ -0.27
NEDD4-212ENST00000557845 LTC4SQ16873 150 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 C2orf68Q2NKX9 166 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 UNQ9370/PRO34162Q6UXP9 181 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 C11orf44Q8N8P7 122 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 LEAP2Q969E1 77 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 MRPS24Q96EL2 167 aaKnown RBP13.39□□□□□ -0.27
NEDD4-212ENST00000557845 MMP28Q9H239 520 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 PSG11Q9UQ72 335 aa13.39□□□□□ -0.27
NEDD4-212ENST00000557845 MGAM2Q2M2H8 2515 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 OOSP1A8MZH6 123 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 WIPF1O43516 503 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 IGHV3-7P01780 117 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 CSF1P09603 554 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 SSTR5P35346 364 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 SPHARQ15513 63 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 HIST2H2BDQ6DRA6 164 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 AWAT2Q6E213 333 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 SLC16A12Q6ZSM3 486 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 C16orf82Q7Z2V1 217 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 MS4A15Q8N5U1 240 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 FAM110DQ8TAY7 271 aaPredicted RBP13.38□□□□□ -0.27
NEDD4-212ENST00000557845 OR5M11Q96RB7 305 aa13.38□□□□□ -0.27
NEDD4-212ENST00000557845 TMEM30CPA0ZSE6 113 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 KCNAB3O43448 404 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 MT-ND4P03905 459 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 MNDAP41218 407 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 GABPB1Q06547 395 aaPredicted RBP13.37□□□□□ -0.27
NEDD4-212ENST00000557845 INSL4Q14641 139 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 CCDC144NLQ6NUI1 221 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 NKAIN3Q8N8D7 197 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 NEK7Q8TDX7 302 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 CCDC107Q8WV48 283 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 SGCDQ92629 289 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 AKR1E2Q96JD6 320 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 WNT10AQ9GZT5 417 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 BANF2Q9H503 90 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 LIN7BQ9HAP6 207 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 SPACA1Q9HBV2 294 aa13.37□□□□□ -0.27
NEDD4-212ENST00000557845 LSM2Q9Y333 95 aaKnown RBP13.37□□□□□ -0.27
NEDD4-212ENST00000557845 AMMECR1Q9Y4X0 333 aaPredicted RBP13.37□□□□□ -0.27
NEDD4-212ENST00000557845 MCRIP1C9JLW8 97 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 H0YHG0 523 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 C15orf65H3BRN8 121 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 PEX14O75381 377 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms