RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 LPAR5Q9H1C0 372 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 ABRACLQ9P1F3 81 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 ETV7Q9Y603 341 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 ATRQ13535 2644 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 MEIKINA0A087WXM9 373 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 A0A0A6YYH2 397 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 IGHV1-69DA0A0B4J2H0 117 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 KBTBD11-OT1A0A1B0GTJ5 212 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 A6NJ64 397 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 GABARAPO95166 117 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 IGHV1-69P01742 117 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 CGB3P0DN86 165 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 CGB7P0DN87 165 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 CHATP28329 748 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 BLVRBP30043 206 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-234ENST00000557703 GLIPR1P48060 266 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 ZNF273Q14593 569 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 ATXN7L3Q14CW9 347 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-234ENST00000557703 KRTAP21-3Q3LHN1 58 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 Q3ZCU0 254 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 C6orf183Q5T699 404 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 HES5Q5TA89 166 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 SIGIRRQ6IA17 410 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 RBMS3Q6XE24 437 aaKnown RBP11.22□□□□□ -0.61
SHMT2-234ENST00000557703 TRAPPC6BQ86SZ2 158 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 NEK7Q8TDX7 302 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 FAM46BQ96A09 425 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 CREB3L1Q96BA8 519 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 ZMAT3Q9HA38 289 aaKnown RBP11.22□□□□□ -0.61
SHMT2-234ENST00000557703 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 SESN1Q9Y6P5 492 aa11.22□□□□□ -0.61
SHMT2-234ENST00000557703 A0A087X0M5 115 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 A0A1B0GX30 115 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 CLPXO76031 633 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 MT-ND4P03905 459 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 TMBIM6P55061 237 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 OR10A3P58181 314 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 Q6ZTK2 550 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 NR2C2APQ86WQ0 139 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 OR52M1Q8NGK5 317 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 RAB2BQ8WUD1 216 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 ZFAND2BQ8WV99 257 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 LHX4Q969G2 390 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 CMTM3Q96MX0 182 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 DAPK2Q9UIK4 370 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 KIF25Q9UIL4 384 aa11.21□□□□□ -0.61
SHMT2-234ENST00000557703 ANK3Q12955 4377 aaKnown RBP11.21□□□□□ -0.62
SHMT2-234ENST00000557703 TRBV6-6A0A0A6YYG2 114 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 SERPINE3A8MV23 424 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 NPIPB11E5RHQ5 1161 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 TCF21O43680 179 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 IGHV4-38-2P0DP08 117 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 CD34P28906 385 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 AANATQ16613 207 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 OR10K2Q6IF99 312 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 IL17RELQ6ZVW7 336 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 MOB1BQ7L9L4 216 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 PLPPR1Q8TBJ4 325 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 ACOT12Q8WYK0 555 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 SLC25A46Q96AG3 418 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 PHF21AQ96BD5 680 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHMT2-234ENST00000557703 MBNL3Q9NUK0 354 aaKnown RBP11.2□□□□□ -0.62
SHMT2-234ENST00000557703 SPATA2Q9UM82 520 aa11.2□□□□□ -0.62
SHMT2-234ENST00000557703 TBL2Q9Y4P3 447 aaKnown RBP11.2□□□□□ -0.62
SHMT2-234ENST00000557703 FOXI3A8MTJ6 420 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-234ENST00000557703 RNASEK-C17orf49H0YIS7 233 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 HSPB6O14558 160 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 SPINT2O43291 252 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 CCL3L1P16619 93 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 RPS19P39019 145 aaKnown RBP11.19□□□□□ -0.62
SHMT2-234ENST00000557703 LGALS4P56470 323 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 CLDN12P56749 244 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 MXD1Q05195 221 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 CTF1Q16619 201 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 STEAP3Q658P3 488 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 TCF23Q7RTU1 214 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 TMEM86BQ8N661 226 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 TPRX1Q8N7U7 411 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 OR10R2Q8NGX6 335 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 ZNF596Q8TC21 504 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 RAB3CQ96E17 227 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 TMEM133Q9H2Q1 129 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 CALYQ9NYX4 217 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 ZNF69Q9UC07 566 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 FAM96BQ9Y3D0 163 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
SHMT2-234ENST00000557703 CLDN34H7C241 214 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 RAB27BO00194 218 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 NPFFO15130 113 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms