RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 OSR2Q8N2R0 312 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 OR10A7Q8NGE5 316 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 OR51A2Q8NGJ7 313 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 RFESDQ8TAC1 157 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 RCC1LQ96I51 464 aaKnown RBP12.62□□□□□ -0.39
TUBB3-213ENST00000557262 SLC29A1Q99808 456 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 JAM3Q9BX67 310 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 PSMB11A5LHX3 300 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 HTR3BO95264 441 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 CLIC3O95833 236 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 MPIG6BO95866 241 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 IGHV3-7P01780 117 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 GZMHP20718 246 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 SOX2P48431 317 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 RAB7AP51149 207 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 MADCAM1Q13477 382 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 KHDC1LQ5JSQ8 128 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 DRAM1Q8N682 238 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 OR10K1Q8NGX5 313 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 OR56B4Q8NH76 319 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 PLPPR1Q8TBJ4 325 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 MRGPRDQ8TDS7 321 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 LEAP2Q969E1 77 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 FAM118AQ9NWS6 357 aa12.61□□□□□ -0.39
TUBB3-213ENST00000557262 CD2P06729 351 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 LIMS3P0CW19 117 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 LIMS4P0CW20 117 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 DIAPH2-AS1Q14236 149 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 HES1Q14469 280 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 LTC4SQ16873 150 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 PIGYQ3MUY2 71 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 CCDC58Q4VC31 144 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 RPL22L1Q6P5R6 122 aaKnown RBP12.6□□□□□ -0.39
TUBB3-213ENST00000557262 OR8H3Q8N146 312 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 RGP1Q92546 391 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-213ENST00000557262 FAM192AQ9GZU8 254 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 FGF20Q9NP95 211 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-213ENST00000557262 TAS2R4Q9NYW5 299 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 ING4Q9UNL4 249 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 ST3GAL6Q9Y274 331 aa12.6□□□□□ -0.39
TUBB3-213ENST00000557262 A0A1W2PPI3 338 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 CDRT1O95170 752 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 TMEM11P17152 192 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 HNF4GQ14541 408 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 ZNF329Q86UD4 541 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 C5orf56Q8N8D9 126 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 SUMF2Q8NBJ7 301 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 CHPT1Q8WUD6 406 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 APH1BQ8WW43 257 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 DPCDQ9BVM2 203 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-213ENST00000557262 METTL9Q9H1A3 318 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 IFT22Q9H7X7 185 aa12.59□□□□□ -0.39
TUBB3-213ENST00000557262 TRAV39A0A0B4J263 110 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 K7EIL1 84 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 FGF16O43320 207 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 CSTBP04080 98 aaKnown RBP12.58□□□□□ -0.4
TUBB3-213ENST00000557262 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
TUBB3-213ENST00000557262 DCKP27707 260 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 GNG10P50151 68 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 NHLRC3Q5JS37 347 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 OR51D1Q8NGF3 324 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 OR52N1Q8NH53 320 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 TMEM106AQ96A25 262 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 S100A13Q99584 98 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 S100A14Q9HCY8 104 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 TMEM138Q9NPI0 162 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 ZFP57Q9NU63 452 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 IL36GQ9NZH8 169 aa12.58□□□□□ -0.4
TUBB3-213ENST00000557262 A0A1W2PPE3 182 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 SERPINE3A8MV23 424 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 OGG1O15527 345 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
TUBB3-213ENST00000557262 IGKV1D-33P01593 117 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 IGKV1-33P01594 117 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 SSTR5P35346 364 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 ZNF93P35789 620 aaPredicted RBP12.57□□□□□ -0.4
TUBB3-213ENST00000557262 ETV1P50549 477 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 KRTAP10-11P60412 298 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 RPL23AP62750 156 aaKnown RBP12.57□□□□□ -0.4
TUBB3-213ENST00000557262 PPP3R1P63098 170 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 ZNF816Q0VGE8 651 aaPredicted RBP12.57□□□□□ -0.4
TUBB3-213ENST00000557262 EBI3Q14213 229 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 DEFB121Q5J5C9 76 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 XAF1Q6GPH4 301 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 TMPRSS11AQ6ZMR5 421 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 MRPL41Q8IXM3 137 aaKnown RBP12.57□□□□□ -0.4
TUBB3-213ENST00000557262 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 NOL4LQ96MY1 436 aaPredicted RBP12.57□□□□□ -0.4
TUBB3-213ENST00000557262 GPR61Q9BZJ8 451 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 PAK1IP1Q9NWT1 392 aaPredicted RBP12.57□□□□□ -0.4
TUBB3-213ENST00000557262 ZNF581Q9P0T4 197 aa12.57□□□□□ -0.4
TUBB3-213ENST00000557262 TMEM30CPA0ZSE6 113 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 WBP4O75554 376 aaKnown RBP12.56□□□□□ -0.4
TUBB3-213ENST00000557262 IGHG2P01859 326 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 BDKRB2P30411 391 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 THBS3P49746 956 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 RBM11P57052 281 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms