RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MTCH1Q9NZJ7 389 aa7.98□□□□□ -1.13
HNRNPC-228ENST00000557033 VPREB3Q9UKI3 123 aa7.98□□□□□ -1.13
HNRNPC-228ENST00000557033 RNF114Q9Y508 228 aa7.98□□□□□ -1.13
HNRNPC-228ENST00000557033 A0A1W2PRD5 423 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 A0A1W2PRF3 423 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 A0A1W2PRM7 423 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 C17orf98A8MV24 154 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 CLPXO76031 633 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 CYB5AP00167 134 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 PRKACBP22694 351 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 MAPK3P27361 379 aaPredicted RBP7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 KIR3DL2P43630 455 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 RBP2P50120 134 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 DLX1P56177 255 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 ACTA2P62736 377 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 ACTG2P63267 376 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 PRB3Q04118 309 aaPredicted RBP7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 KLRD1Q13241 179 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 SLC25A26Q70HW3 274 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 UTS2BQ765I0 119 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 ENTHD1Q8IYW4 607 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 RDH10Q8IZV5 341 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 CBR4Q8N4T8 237 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 LINC01006Q8NI28 216 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 HARBI1Q96MB7 349 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 MBOAT4Q96T53 435 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 CITED1Q99966 193 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 KCNK15Q9H427 330 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 OR14J1Q9UGF5 321 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 GMPPBQ9Y5P6 360 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 A3GALT2U3KPV4 340 aa7.97□□□□□ -1.13
HNRNPC-228ENST00000557033 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.13
HNRNPC-228ENST00000557033 IGKV1-27A0A075B6S5 117 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 LOC107986453A0A1B0GWG9 222 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 CGB1A6NKQ9 187 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 H3BSH0 61 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 ANGPTL7O43827 346 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 ZNF737O75373 536 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 FADS2O95864 444 aaKnown RBP7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 RBP4P02753 201 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 MT-ND2P03891 347 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 HTR1AP08908 422 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 ATF1P18846 271 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 CEBPDP49716 269 aaPredicted RBP7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 MTCP1P56278 107 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 OR12D2P58182 307 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 PROK1P58294 105 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 COL10A1Q03692 680 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 MEF2CQ06413 473 aaPredicted RBP7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 MRPL28Q13084 256 aaKnown RBP7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 ZBTB49Q6ZSB9 765 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 Q6ZSV7 163 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 GDPD3Q7L5L3 318 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 SYS1Q8N2H4 156 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 PNKDQ8N490 385 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 OR4M1Q8NGD0 313 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 RHOXF1Q8NHV9 184 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 HAVCR2Q8TDQ0 301 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 SLAMF9Q96A28 289 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 SPSB1Q96BD6 273 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 FGGYQ96C11 551 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 ADAT3Q96EY9 351 aaPredicted RBP7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 SSX3Q99909 188 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 NEK6Q9HC98 313 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 S100A14Q9HCY8 104 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 INPP5EQ9NRR6 644 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 GLS2Q9UI32 602 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 HHLA2Q9UM44 414 aa7.96□□□□□ -1.14
HNRNPC-228ENST00000557033 IGKV1-9A0A0C4DH69 117 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 LOC100130705A0A1B0GUX0 176 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 LINC00473A8K010 186 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 F8VVB4 439 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 F8VWA3 439 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 J3QLW9 94 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 TIMM23O14925 209 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 DBTP11182 482 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 CCL3L1P16619 93 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 ZNF19P17023 458 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 ZNF20P17024 532 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 AZGP1P25311 298 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 NANOS3P60323 173 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 RAB40BQ12829 278 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 ZNF146Q15072 292 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 SPIN3Q5JUX0 258 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 LHFPL3Q86UP9 236 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 FAM58AQ8N1B3 248 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 BATF2Q8N1L9 274 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 ASCC1Q8N9N2 400 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 NHLRC2Q8NBF2 726 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 OR13D1Q8NGV5 346 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 RNF183Q96D59 192 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 LGALS12Q96DT0 336 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 PELI1Q96FA3 418 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 C4orf36Q96KX1 117 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 SLC29A1Q99808 456 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 SPXQ9BT56 116 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 RHOFQ9HBH0 211 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 RAB18Q9NP72 206 aa7.95□□□□□ -1.14
HNRNPC-228ENST00000557033 RPL36Q9Y3U8 105 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms