RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MAGEA5P43359 124 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 KIR3DL2P43630 455 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 CAV3P56539 151 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 PCBD1P61457 104 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 PLGLB1Q02325 96 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 FMODQ06828 376 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 ECH1Q13011 328 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 KLF5Q13887 457 aaPredicted RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 INSL4Q14641 139 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 SNAI3Q3KNW1 292 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 ZNF585BQ52M93 769 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 WDR38Q5JTN6 314 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 FAM27D1Q5T7N8 215 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 BCL2L15Q5TBC7 163 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 PLET1Q6UQ28 207 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 DHRS11Q6UWP2 260 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 Q6ZTK2 550 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 FOXL2NBQ6ZUU3 175 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 CREB3L2Q70SY1 520 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 MOB3BQ86TA1 216 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TMEM17Q86X19 198 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 KLHDC1Q8N7A1 406 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 ZNF433Q8N7K0 673 aaPredicted RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TMEM178AQ8NBL3 297 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 DUSP18Q8NEJ0 188 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 OR2M7Q8NG81 312 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 OR13C5Q8NGS8 318 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 ENKURQ8TC29 256 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 SMAP2Q8WU79 429 aaPredicted RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 FCAMRQ8WWV6 532 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 C11orf40Q8WZ69 217 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 PSMF1Q92530 271 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TMEM54Q969K7 222 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 DNAJA3Q96EY1 480 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 SDHCQ99643 169 aaPredicted RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 EMC6Q9BV81 110 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 ULBP2Q9BZM5 246 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 RNF122Q9H9V4 155 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 OR2S2Q9NQN1 319 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 DIABLOQ9NR28 239 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 RBFOX1Q9NWB1 397 aaKnown RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 NUFIP1Q9UHK0 495 aaKnown RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 CYB5R1Q9UHQ9 305 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 ZNF391Q9UJN7 358 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 OR52A1Q9UKL2 312 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 AK6Q9Y3D8 172 aaKnown RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 DOCK10Q96BY6 2186 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 REV3LO60673 3130 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 KIAA1549Q9HCM3 1950 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CACNA1CQ13936 2221 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ALPK2Q86TB3 2170 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 A0A0A6YYH2 397 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 A0A1B0GW15 77 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 LOC107986453A0A1B0GWG9 222 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CLEC18AA5D8T8 446 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR5H15A6NDH6 313 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 A6NJ64 397 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 C15orf62A8K5M9 175 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 INAFM1C9JVW0 142 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 SLC17A2O00624 439 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 TNFSF11O14788 317 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 PIN1P1O15428 100 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 LYRM1O43325 122 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 SPRY3O43610 288 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CHST1O43916 411 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 NXPH2O95156 264 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 FARS2O95363 451 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 TMEM50AO95807 157 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ACTL6AO96019 429 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 EIF4EP06730 217 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 SP1P08047 785 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CST2P09228 141 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ANXA3P12429 323 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ATF1P18846 271 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 FAUP35544 74 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 NBL1P41271 181 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 UCNP55089 124 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 RAB25P57735 213 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR10A3P58181 314 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 B3GALT5-AS1P59052 145 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ARPC4P59998 168 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 POLR2GP62487 172 aaKnown RBP eCLIP4.29□□□□□ -1.72
SRP54-211ENST00000556445 SSBP1Q04837 148 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 SCRN3Q0VDG4 424 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 MFAP5Q13361 173 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OPCMLQ14982 345 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ATXN7L3Q14CW9 347 aaPredicted RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 SGCAQ16586 387 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 SLC25A35Q3KQZ1 300 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CLVS2Q5SYC1 327 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ZNF57Q68EA5 555 aaPredicted RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 C19orf35Q6ZS72 473 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 PGAP1Q75T13 922 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 FCRLAQ7L513 359 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 GDPD3Q7L5L3 318 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CHMP1BQ7LBR1 199 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 AAED1Q7RTV5 226 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms