RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 BTF3P20290 206 aaKnown RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ACHEP22303 614 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 PRKACBP22694 351 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 DUSP1P28562 367 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 GRPRP30550 384 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ARR3P36575 388 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 NUP62P37198 522 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 NAA10P41227 235 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 RAD52P43351 418 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 VEGFCP49767 419 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TAS2R31P59538 309 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 RAP1BP61224 184 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 RAP1AP62834 184 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ERVK-25P63136 954 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ZP4Q12836 540 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 GK2Q14410 553 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ARL6IP1Q15041 203 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 PCK2Q16822 640 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 CEACAM16Q2WEN9 425 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 PCGF3Q3KNV8 242 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ACTBL2Q562R1 376 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 C1orf100Q5SVJ3 147 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 CTRB2Q6GPI1 263 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 STEAP1BQ6NZ63 245 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 C12orf54Q6X4T0 127 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 Q6ZTK2 550 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 PGAP1Q75T13 922 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 PRSS45Q7RTY3 260 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF329Q86UD4 541 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM17Q86X19 198 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ZCCHC24Q8N2G6 241 aaKnown RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 C12orf45Q8N5I9 185 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF676Q8N7Q3 588 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 CCDC54Q8NEL0 328 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 OR6K6Q8NGW6 343 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TNFAIP8L1Q8WVP5 186 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TAAR8Q969N4 342 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM106AQ96A25 262 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 FAM3DQ96BQ1 224 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 MSI2Q96DH6 328 aaKnown RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 KTI12Q96EK9 354 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ELMOD3Q96FG2 381 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ALKBH3Q96Q83 286 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-240ENST00000556339 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 GFI1Q99684 422 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 UQCC2Q9BRT2 126 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 GINS4Q9BRT9 223 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 EMC6Q9BV81 110 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 C19orf24Q9BVV8 132 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ELOVL1Q9BW60 279 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 LINC00470Q9BZP3 86 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TXNIPQ9H3M7 391 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 PLK3Q9H4B4 646 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 NARFLQ9H6Q4 476 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ZC4H2Q9NQZ6 224 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM160Q9NX00 188 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 SDHAF2Q9NX18 166 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF224Q9NZL3 707 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 COMMD9Q9P000 198 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF69Q9UC07 566 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 SHPKQ9UHJ6 478 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 KCNG2Q9UJ96 466 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 RAB22AQ9UL26 194 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 COPS3Q9UNS2 423 aa3.33□□□□□ -1.88
ATXN3-240ENST00000556339 IGHV2OR16-5A0A0B4J2B6 119 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 IGHV4-61A0A0C4DH41 118 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 A0A1B0GTI1 187 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 KANTRA0A1W2PQU2 76 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 PRSS37A4D1T9 235 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 RNF222A6NCQ9 220 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 A6NIN4 97 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 CEACAM18A8MTB9 384 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 LYNX1G3V0Z9 82 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 RHODO00212 210 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 PRYO14603 147 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 LDLRAD4O15165 306 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 PPIHO43447 177 aaKnown RBP3.32□□□□□ -1.88
ATXN3-240ENST00000556339 TCF21O43680 179 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 SYNGR3O43761 229 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 SELENOFO60613 162 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 NPIPB7O75200 414 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 FARS2O95363 451 aaKnown RBP3.32□□□□□ -1.88
ATXN3-240ENST00000556339 RAB3DO95716 219 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 CYB5AP00167 134 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 HLA-HP01893 362 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 BGLAPP02818 100 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 LYNX1P0DP58 116 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 NR2C1P13056 603 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 GTF2F2P13984 249 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 IGFBP3P17936 291 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-240ENST00000556339 ADRA2CP18825 462 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 CXCL2P19875 107 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 RAB3AP20336 220 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 CCNOP22674 350 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 HTR2CP28335 458 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 HSD11B1P28845 292 aa3.32□□□□□ -1.88
ATXN3-240ENST00000556339 PSMB10P40306 273 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms