RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ELLP55199 621 aaPredicted RBP12.82□□□□□ -0.36
NEK9-209ENST00000556170 SURF2Q15527 256 aaPredicted RBP12.82□□□□□ -0.36
NEK9-209ENST00000556170 ZNF709Q8N972 641 aa12.82□□□□□ -0.36
NEK9-209ENST00000556170 OR2J1Q9GZK6 312 aa12.82□□□□□ -0.36
NEK9-209ENST00000556170 ZNF552Q9H707 407 aaPredicted RBP12.82□□□□□ -0.36
NEK9-209ENST00000556170 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 ZFP92A6NM28 416 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 CDRT15L2A8MXV6 281 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 LINC01387J3KSC0 135 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 KRASP01116 189 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 RNF224P0DH78 156 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 DAOP14920 347 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 CHATP28329 748 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
NEK9-209ENST00000556170 QRFPP83859 136 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 ZNF266Q14584 549 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 LCN15Q6UWW0 184 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 MDP1Q86V88 176 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 LPAR3Q9UBY5 353 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 V9GYS6 101 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 ZNF716A6NP11 495 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 GPR37O15354 613 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 GATCO43716 136 aaKnown RBP12.81□□□□□ -0.36
NEK9-209ENST00000556170 IL2RAP01589 272 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 HGFACQ04756 655 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 RNPS1Q15287 305 aaKnown RBP12.81□□□□□ -0.36
NEK9-209ENST00000556170 THNSL2Q86YJ6 484 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 OR5C1Q8NGR4 320 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 MEGF10Q96KG7 1140 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 UQCC1Q9NVA1 299 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 OSGIN2Q9Y236 505 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 DEFB108AA8MXU0 73 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 SELENOVP59797 346 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 KIAA0141Q14154 515 aaPredicted RBP12.81□□□□□ -0.36
NEK9-209ENST00000556170 SDSLQ96GA7 329 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 RSRP1Q9BUV0 290 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 RNF126Q9BV68 326 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 PRO1933Q9H354 126 aa12.81□□□□□ -0.36
NEK9-209ENST00000556170 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 CYTIPO60759 359 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 CYC1P08574 325 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 NTF4P34130 210 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 FHITP49789 147 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 OR2C3Q8N628 320 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 HEATR1Q9H583 2144 aaKnown RBP12.8□□□□□ -0.36
NEK9-209ENST00000556170 IGKV1-12A0A0C4DH73 117 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 IGKV1D-12P01611 117 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 MBPP02686 304 aaPredicted RBP12.8□□□□□ -0.36
NEK9-209ENST00000556170 H2AFB1P0C5Y9 115 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 CSRP1P21291 193 aaKnown RBP12.8□□□□□ -0.36
NEK9-209ENST00000556170 NFYBP25208 207 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
NEK9-209ENST00000556170 RIPPLY2Q5TAB7 128 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 UNKLQ9H9P5 680 aaKnown RBP12.8□□□□□ -0.36
NEK9-209ENST00000556170 IGKV1-27A0A075B6S5 117 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 EIF3GO75821 320 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEK9-209ENST00000556170 IFNA10P01566 189 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 SP9P0CG40 484 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 DTYMKP23919 212 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 GGNQ86UU5 652 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 IP6K3Q96PC2 410 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 TLNRD1Q9H1K6 362 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 FN3KRPQ9HA64 309 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 PROK2Q9HC23 129 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 ZNF318Q5VUA4 2279 aa12.8□□□□□ -0.36
NEK9-209ENST00000556170 UMAD1C9J7I0 102 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 FGF2P09038 288 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 CTXN2P0C2S0 81 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 ZNF816Q0VGE8 651 aaPredicted RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 TPRX1Q8N7U7 411 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 PLK3Q9H4B4 646 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 PLEKHF2Q9H8W4 249 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 MMP26Q9NRE1 261 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 FOXD3Q9UJU5 478 aaPredicted RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 POLDIP2Q9Y2S7 368 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 TMED3Q9Y3Q3 217 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 IGHV3-43A0A0B4J1X8 118 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 SH2D1BO14796 132 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 IGHV3-43DP0DP04 118 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 DHODHQ02127 395 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 TMEM267Q0VDI3 215 aaPredicted RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 EIF3IQ13347 325 aaKnown RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 PUSL1Q8N0Z8 303 aaKnown RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 OR10V1Q8NGI7 309 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 MSL2Q9HCI7 577 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 MYOZ1Q9NP98 299 aaPredicted RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 hCG_38984A0A1B0GV85 526 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 C21orf140B9A014 251 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 GPR137BO60478 399 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 ZNF708P17019 499 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 CEACAM6P40199 344 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 SUPT4H1P63272 117 aaKnown RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 CXorf66Q5JRM2 361 aaPredicted RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
NEK9-209ENST00000556170 PPP1CBP62140 327 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 ERGIC1Q969X5 290 aa12.79□□□□□ -0.36
NEK9-209ENST00000556170 MARS2Q96GW9 593 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms