RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TAS2R19P59542 299 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 AP3S2P59780 193 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 SSBP1Q04837 148 aaKnown RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 DYRK1AQ13627 763 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 RSBN1Q5VWQ0 802 aaPredicted RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 ZNF787Q6DD87 383 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 STEAP1BQ6NZ63 245 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 ZNF497Q6ZNH5 498 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 ZNF788Q6ZQV5 615 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 TMEM229BQ8NBD8 167 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 TMEM185AQ8NFB2 350 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 OR56B4Q8NH76 319 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 SDSLQ96GA7 329 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 COQ2Q96H96 371 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 SNX22Q96L94 193 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 ZNF665Q9H7R5 613 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 TAS2R8Q9NYW2 309 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 CELSR2Q9HCU4 2923 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 K7N7A8 449 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 SDCBPO00560 298 aaPredicted RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 TNFRSF13BO14836 293 aaPredicted RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 PPIHO43447 177 aaKnown RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 FCN3O75636 299 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 RAB3DO95716 219 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 TK1P04183 234 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 DTYMKP23919 212 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 CCR6P51684 374 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 KRBOX4Q5JUW0 171 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 ZNF561Q8N587 486 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 UBALD1Q8TB05 177 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 SUN5Q8TC36 379 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 MARVELD3Q96A59 401 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 C14orf79Q96F83 325 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 DCTN5Q9BTE1 182 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 Q9N2K0 584 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 KIF25Q9UIL4 384 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 TMA7Q9Y2S6 64 aaKnown RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 TACC2O95359 2948 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 MAST4O15021 2626 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 MEIKINA0A087WXM9 373 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 CENPXA8MT69 81 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 SIGLEC5O15389 551 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 ADAM20O43506 726 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 IGHV2-70P01814 119 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 IGHV4-39P01824 125 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 CD74P04233 296 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 SCTP09683 121 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 AKAIN1P0CW23 69 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 GIFP27352 417 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 MDH2P40926 338 aaKnown RBP8.49□□□□□ -1.05
SRP54-208ENST00000555557 EDDM3BP56851 147 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 IL13RA1P78552 427 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 MRPS11P82912 194 aaKnown RBP8.49□□□□□ -1.05
SRP54-208ENST00000555557 ATPAF1Q5TC12 328 aaPredicted RBP8.49□□□□□ -1.05
SRP54-208ENST00000555557 SHEQ5VZ18 495 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 PEG10Q86TG7 708 aaKnown RBP8.49□□□□□ -1.05
SRP54-208ENST00000555557 ZNF525Q8N782 197 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 MMP28Q9H239 520 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 NARFLQ9H6Q4 476 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 CHODLQ9H9P2 273 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 SEBOXQ9HB31 216 aaPredicted RBP8.49□□□□□ -1.05
SRP54-208ENST00000555557 MYOZ1Q9NP98 299 aaPredicted RBP8.49□□□□□ -1.05
SRP54-208ENST00000555557 CTSZQ9UBR2 303 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 PRELID1Q9Y255 219 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 VPS13CQ709C8 3753 aa8.49□□□□□ -1.05
SRP54-208ENST00000555557 FAM240BA0A1B0GVZ2 78 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 CHRFAM7AQ494W8 412 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 IGSF11Q5DX21 431 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 RNASE10Q5GAN6 216 aaKnown RBP8.48□□□□□ -1.05
SRP54-208ENST00000555557 MZT2BQ6NZ67 158 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 ZNF782Q6ZMW2 699 aaPredicted RBP8.48□□□□□ -1.05
SRP54-208ENST00000555557 GAPTQ8N292 157 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 PRR18Q8N4B5 295 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 OR5AP2Q8NGF4 316 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 OR51S1Q8NGJ8 323 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 SLC6A7Q99884 636 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 RIMS4Q9H426 269 aaPredicted RBP8.48□□□□□ -1.05
SRP54-208ENST00000555557 ZNF286AQ9HBT8 521 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 ANXA10Q9UJ72 324 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 EDARQ9UNE0 448 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 TANC2Q9HCD6 1990 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 CENPEQ02224 2701 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 TMEM30CPA0ZSE6 113 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 NKX6-3A6NJ46 265 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 MGST3O14880 152 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 PTTG1O95997 202 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 AMY2AP04746 511 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 ZNF735P0CB33 412 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 NDUFB7P17568 137 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 SLC6A1P30531 599 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 OR3A3P47888 321 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 TMEM33P57088 247 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 SCGB2B2Q4G0G5 96 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 SLC35E4Q6ICL7 350 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 ZNF880Q6PDB4 577 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 CCBE1Q6UXH8 406 aaPredicted RBP8.48□□□□□ -1.05
SRP54-208ENST00000555557 SLC36A1Q7Z2H8 476 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 OR5H2Q8NGV7 314 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 PPP1R35Q8TAP8 253 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms