RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CA2P00918 260 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 Q6ZS52 159 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 FAM26EQ8N5C1 309 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 BEND2Q8NDZ0 799 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ADAT3Q96EY9 351 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-216ENST00000555002 METTL12A8MUP2 240 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 NPIPB6E9PJ23 425 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 CD81P60033 236 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 DUSP8Q13202 625 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM240Q5SV17 173 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 FAM27D1Q5T7N8 215 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 CYS1Q717R9 158 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 BAP18Q8IXM2 172 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 OR52M1Q8NGK5 317 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 SLC25A40Q8TBP6 338 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 GPR27Q9NS67 375 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 DNAJB12Q9NXW2 375 aaKnown RBP6.1□□□□□ -1.43
SYNE2-216ENST00000555002 FOXJ3Q9UPW0 622 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 OR51B2Q9Y5P1 312 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 INSIG2Q9Y5U4 225 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 SMPD2O60906 423 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 KLKB1P03952 638 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF735P0CB33 412 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 PCMT1P22061 227 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 UNQ9370/PRO34162Q6UXP9 181 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 SPICQ8N5J4 248 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 BVESQ8NE79 360 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 MMP26Q9NRE1 261 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 SSC5DA1L4H1 1573 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 A0A087WUJ7 227 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 RAB29O14966 203 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 CD74P04233 296 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ADRA2AP08913 450 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 OR5AC1P0C628 307 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 DLX6P56179 175 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 CDK5R1Q15078 307 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 OR2W3Q7Z3T1 314 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 OR10G8Q8NGN5 311 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 CHRNA10Q9GZZ6 450 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 WSB1Q9Y6I7 421 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 A0A1W2PRX2 142 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ISLRO14498 428 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 PMELP40967 661 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ANKRD37Q7Z713 158 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 APOBEC4Q8WW27 367 aaKnown RBP6.1□□□□□ -1.43
SYNE2-216ENST00000555002 HARBI1Q96MB7 349 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 GPR35Q9HC97 309 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 MANBALQ9NQG1 85 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 SPAARA0A1B0GVQ0 90 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 TFAP2AP05549 437 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF32P17041 273 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 DDOSTP39656 456 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 LRRC75AQ8NAA5 344 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 CITED2Q99967 270 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-216ENST00000555002 COL16A1Q07092 1604 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-216ENST00000555002 C5P01031 1676 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM189A5PLL7 270 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 CHST1O43916 411 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 COX6CP09669 75 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 GABRA6Q16445 453 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM229BQ8NBD8 167 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 GEMIN7Q9H840 131 aaKnown RBP6.09□□□□□ -1.43
SYNE2-216ENST00000555002 CCL27Q9Y4X3 112 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 C1QBP02746 253 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 FPR2P25090 351 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 ATP5J2P56134 94 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 SUMO2P61956 95 aaKnown RBP6.09□□□□□ -1.43
SYNE2-216ENST00000555002 KISS1Q15726 138 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 C16orf47Q6ZP98 133 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-216ENST00000555002 PHLDA3Q9Y5J5 127 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 LINC01387J3KSC0 135 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF56Q15929 161 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 C10orf126Q8N4M7 172 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 OR4B1Q8NGF8 309 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 HEXA-AS1Q9H8Q6 139 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 CLN8Q9UBY8 286 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 TFF2Q03403 129 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 DPPA3Q6W0C5 159 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 MED30Q96HR3 178 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 FFAR1O14842 300 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 TM4SF4P48230 202 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF324BQ6AW86 544 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-216ENST00000555002 KIRREL2Q6UWL6 708 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 SFRP2Q96HF1 295 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 ACER2Q5QJU3 275 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 AFMIDQ63HM1 303 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 UBE2DNLQ8IWF7 75 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 MRGPRX3Q96LB0 322 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 ZFP30Q9Y2G7 519 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 NPFFO15130 113 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 GPX5O75715 221 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 HKR1P10072 659 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 HIST1H1BP16401 226 aaKnown RBP6.09□□□□□ -1.43
SYNE2-216ENST00000555002 LDLRAD1Q5T700 205 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 PTOV1Q86YD1 416 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 C1orf210Q8IVY1 113 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 NTNG2Q96CW9 530 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 SLC25A10Q9UBX3 287 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-216ENST00000555002 PAM16Q9Y3D7 125 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms