RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 SYNGR1O43759 233 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 IGKV1-39P01597 117 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 IGKV1D-39P04432 117 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 CTXN2P0C2S0 81 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 AKR1C3P42330 323 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 ID4P47928 161 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 EWSR1Q01844 656 aaKnown RBP eCLIP10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 ZNF146Q15072 292 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 TESK1Q15569 626 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 MKXQ8IYA7 352 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 SUMF2Q8NBJ7 301 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 CLCF1Q9UBD9 225 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 FAM96BQ9Y3D0 163 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 NKX2-6A6NCS4 301 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 HLA-HP01893 362 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 MSMO1Q15800 293 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 ACSF3Q4G176 576 aaPredicted RBP10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 LINC00518Q8N0U6 118 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 MALSU1Q96EH3 234 aa10.71□□□□□ -0.69
PPP4R3A-206ENST00000554943 CD300LBA8K4G0 201 aa10.71□□□□□ -0.7
PPP4R3A-206ENST00000554943 PGLYRP1O75594 196 aaPredicted RBP10.71□□□□□ -0.7
PPP4R3A-206ENST00000554943 GPM6AP51674 278 aa10.71□□□□□ -0.7
PPP4R3A-206ENST00000554943 CBLN2Q8IUK8 224 aa10.71□□□□□ -0.7
PPP4R3A-206ENST00000554943 KIRREL1Q96J84 757 aa10.71□□□□□ -0.7
PPP4R3A-206ENST00000554943 SH3BGRL3Q9H299 93 aa10.71□□□□□ -0.7
PPP4R3A-206ENST00000554943 B4GALT7Q9UBV7 327 aa10.71□□□□□ -0.7
PPP4R3A-206ENST00000554943 ST8SIA3O43173 380 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 PPIHO43447 177 aaKnown RBP10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 MED6O75586 246 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 S100A10P60903 97 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 NHLH2Q02577 135 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 HMGN3Q15651 99 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 PIP4P1Q86T03 277 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 COA4Q9NYJ1 87 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 DOCK7Q96N67 2140 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 TRAV1-1A0A0B4J248 108 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 FAM221AA4D161 298 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 C5orf49A4QMS7 147 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 RNF212Q495C1 297 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 Q6ZRG5 221 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 MED12LQ86YW9 2145 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 C2CD4CQ8TF44 421 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 FAM86C1Q9NVL1 165 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 GSKIPQ9P0R6 139 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 PRSS50Q9UI38 385 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 CEP250Q9BV73 2442 aa10.7□□□□□ -0.7
PPP4R3A-206ENST00000554943 A0A0G2JRQ6 117 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 CDRT15L2A8MXV6 281 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 TRAPPC6AO75865 159 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 HAAOP46952 286 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 BAXQ07812 192 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 C11orf53Q8IXP5 236 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 OR5L1Q8NGL2 311 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 ARRDC1-AS1Q9H2J1 176 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 SEBOXQ9HB31 216 aaPredicted RBP10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 LOC400499M0QZD8 3231 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 ZDBF2Q9HCK1 2354 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 KIR2DS1A0A191URI9 304 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 NDUFS6O75380 124 aaKnown RBP10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 EPHA1P21709 976 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 KIR2DS4P43632 304 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 MEOX1P50221 254 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 KIR2DS1Q14954 304 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 OR8G1Q15617 311 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 PHLDA2Q53GA4 152 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 IGF2-ASQ6U949 168 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 DPPA3Q6W0C5 159 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 LSM10Q969L4 123 aaKnown RBP10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 APH1AQ96BI3 265 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 ELL3Q9HB65 397 aaPredicted RBP10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 F8W036 122 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 RAB1AP62820 205 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 PDCD1Q15116 288 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 FBXW9Q5XUX1 488 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 OR2C3Q8N628 320 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 C15orf54Q8N8G6 183 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 SPACA1Q9HBV2 294 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 DLL3Q9NYJ7 618 aa10.69□□□□□ -0.7
PPP4R3A-206ENST00000554943 IQCF6A8MYZ5 107 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 SMPD2O60906 423 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 CNOT4O95628 575 aaKnown RBP10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 MT-CO3P00414 261 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 PRKACAP17612 351 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 COX5AP20674 150 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 AGAP20933 346 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 VDAC1P21796 283 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 MDH2P40926 338 aaKnown RBP10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 HLA-DRB3P79483 266 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 CLEC9AQ6UXN8 241 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 HRH4Q9H3N8 390 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 ESRP2Q9H6T0 727 aaKnown RBP10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 IL17BQ9UHF5 180 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 KLF13Q9Y2Y9 288 aaPredicted RBP10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 DEGS1O15121 323 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 PHF1O43189 567 aaPredicted RBP10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 OR8U8P0C7N1 319 aa10.68□□□□□ -0.7
PPP4R3A-206ENST00000554943 PGA5P0DJD9 388 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms