RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 P2RX3P56373 397 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 KRTAP10-9P60411 292 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 EDDM3AQ14507 147 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 DEFB113Q30KQ7 82 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 MZT2BQ6NZ67 158 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF880Q6PDB4 577 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF554Q86TJ5 538 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 BEST4Q8NFU0 473 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 NRGNQ92686 78 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 COQ2Q96H96 371 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 HDHD3Q9BSH5 251 aaPredicted RBP11.96□□□□□ -0.49
SHOX2-206ENST00000554685 Q9N2K0 584 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 KCNIP1Q9NZI2 227 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 OR6C3Q9NZP0 311 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 MEIKINA0A087WXM9 373 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 NDUFB7P17568 137 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 EDDM3BP56851 147 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 ARPC4P59998 168 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 AESQ08117 197 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 ASAH1Q13510 395 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 KLF9Q13886 244 aaPredicted RBP11.95□□□□□ -0.5
SHOX2-206ENST00000554685 MEF2DQ14814 521 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 C11orf91Q3C1V1 193 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 CHRFAM7AQ494W8 412 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 RNASE10Q5GAN6 216 aaKnown RBP11.95□□□□□ -0.5
SHOX2-206ENST00000554685 HIST2H2BCQ6DN03 193 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 GVQW1Q8N7I0 195 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 OR4K15Q8NH41 348 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
SHOX2-206ENST00000554685 MBNL3Q9NUK0 354 aaKnown RBP11.95□□□□□ -0.5
SHOX2-206ENST00000554685 KIF25Q9UIL4 384 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 DOPEY2Q9Y3R5 2298 aa11.95□□□□□ -0.5
SHOX2-206ENST00000554685 TRBV23-1A0A0A0MS06 115 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 ODAMA1E959 279 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 TRDCB7Z8K6 153 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 DVL1O14640 695 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 CD74P04233 296 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 HEXAP06865 529 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 CTXN2P0C2S0 81 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 SELLP14151 372 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 GZMHP20718 246 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 OR3A3P47888 321 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 HLA-DRB3P79483 266 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 IFITM3Q01628 133 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 MEF2CQ06413 473 aaPredicted RBP11.94□□□□□ -0.5
SHOX2-206ENST00000554685 ZNF565Q8N9K5 539 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 POC5Q8NA72 575 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 OR5H2Q8NGV7 314 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 C10orf105Q8TEF2 133 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 RAB39BQ96DA2 213 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 BPESC1Q9GZL8 116 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 ING3Q9NXR8 418 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 CTSZQ9UBR2 303 aa11.94□□□□□ -0.5
SHOX2-206ENST00000554685 ZNF230Q9UIE0 474 aaPredicted RBP11.94□□□□□ -0.5
SHOX2-206ENST00000554685 DCHS2Q6V1P9 2916 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 TRGV10A0A0A0MS01 117 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 A0A1B0GW55 424 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 hADV38S2A0JD32 116 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
SHOX2-206ENST00000554685 LYRM1O43325 122 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DIRAS3O95661 229 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 RAB3DO95716 219 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 CD3DP04234 171 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 IFNA6P05013 189 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 WNT2P09544 360 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4L2P0CJ85 424 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4L3P0CJ86 424 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4L4P0CJ87 422 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4L5P0CJ88 424 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4L6P0CJ89 424 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4L7P0CJ90 424 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 SLC25A16P16260 332 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 HLA-DMAP28067 261 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 GLP1RP43220 463 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 GLIPR1P48060 266 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 CDK10Q15131 360 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4L9Q6RFH8 374 aaPredicted RBP11.93□□□□□ -0.5
SHOX2-206ENST00000554685 TMEM17Q86X19 198 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 OR4A4PQ8NGN8 299 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 MAFIPQ8WZ33 124 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 LURAP1Q96LR2 239 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 NECAP2Q9NVZ3 263 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 DUX4Q9UBX2 424 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 OPN4Q9UHM6 478 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 LRBAP50851 2863 aa11.93□□□□□ -0.5
SHOX2-206ENST00000554685 LINC00854A0A1B0GVQ3 168 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 A0A1W2PPH5 198 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 DISC1C4P0D8 188 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 FABP7O15540 132 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 SPINT2O43291 252 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 FCER2P06734 321 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 HRH1P35367 487 aa11.92□□□□□ -0.5
SHOX2-206ENST00000554685 GNB2P62879 340 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms