RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 C1orf100Q5SVJ3 147 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 ATAD3CQ5T2N8 411 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 GLT8D1Q68CQ7 371 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 OR52W1Q6IF63 320 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 OR4P4Q8NGL7 312 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 OR4F5Q8NH21 305 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 MALSU1Q96EH3 234 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 Q96M66 194 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 BANF2Q9H503 90 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 CALYQ9NYX4 217 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 A0A087X0M5 115 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 A0A1B0GX30 115 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 FAM172BPA6NC97 362 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 MRPS14O60783 128 aaKnown RBP16.47■□□□□ 0.23
FOXA1-203ENST00000553751 CRTAPO75718 401 aaPredicted RBP16.47■□□□□ 0.23
FOXA1-203ENST00000553751 CD37P11049 281 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 CD34P28906 385 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 GABRA5P31644 462 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 FABP5Q01469 135 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 EMX1Q04741 257 aaPredicted RBP16.47■□□□□ 0.23
FOXA1-203ENST00000553751 SSX1Q16384 188 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 SSX2Q16385 188 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 UTF1Q5T230 341 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 MINOS1Q5TGZ0 78 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 DHRS7BQ6IAN0 325 aaPredicted RBP16.47■□□□□ 0.23
FOXA1-203ENST00000553751 SLC35E4Q6ICL7 350 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 BRICD5Q6PL45 260 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 RTN4RL2Q86UN3 420 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 ABHD12Q8N2K0 398 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 ZNF565Q8N9K5 539 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 PIFOQ8TCI5 191 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 MRGPRDQ8TDS7 321 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 KIRREL1Q96J84 757 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 SELENOIQ9C0D9 397 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 LINC00574Q9H8X3 128 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 ZNF286AQ9HBT8 521 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 SPACA1Q9HBV2 294 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 GHRLQ9UBU3 117 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 MINOS1-NBL1R4GNA1 71 aa16.47■□□□□ 0.23
FOXA1-203ENST00000553751 A0A1B0GUS0 222 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A10PA6NDY2 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A18PA6NE21 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A16PA6NEW6 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A20PA6NIJ5 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A7PA6NKC0 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A22PA8MWA6 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A12PA8MX19 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A5PA8MXJ8 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A23PA8MXZ1 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 IL1AP01583 271 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A15PP0C7V4 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A13PP0C7W8 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A14PP0C7W9 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM90A24PP0C7X0 464 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 UBBP0CG47 229 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 LY6EQ16553 131 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 PLA1AQ53H76 456 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 FAM46BQ96A09 425 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 GFI1Q99684 422 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 CST11Q9H112 138 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 SLITRK2Q9H156 845 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 BEX1Q9HBH7 125 aa16.46■□□□□ 0.23
FOXA1-203ENST00000553751 TRAV39A0A0B4J263 110 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 TMEM30CPA0ZSE6 113 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 POM121CA8CG34 1229 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 NPIPB11E5RHQ5 1161 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 SLC22A1O15245 554 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 ARL6IP5O75915 188 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 IGLV1-47P01700 117 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 SSTR5P35346 364 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 FAM189A2Q15884 450 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 Q6ZSV7 163 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 NEK7Q8TDX7 302 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 NDUFB11Q9NX14 153 aa16.45■□□□□ 0.22
FOXA1-203ENST00000553751 CLPSL1A2RUU4 121 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 VSIG8P0DPA2 414 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 JUNBP17275 347 aaPredicted RBP16.44■□□□□ 0.22
FOXA1-203ENST00000553751 HTR1DP28221 377 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 HTR2CP28335 458 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 OLFML2AQ68BL7 652 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 SIGIRRQ6IA17 410 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 RAB12Q6IQ22 244 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 ZNF497Q6ZNH5 498 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 SVOPQ8N4V2 548 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 LINC01006Q8NI28 216 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 NDNFQ8TB73 568 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 ZNF596Q8TC21 504 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 CYYR1Q96J86 154 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 YTHDF1Q9BYJ9 559 aaKnown RBP16.44■□□□□ 0.22
FOXA1-203ENST00000553751 KCNK15Q9H427 330 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 IDI2-AS1Q9NZ38 188 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 HILPDAQ9Y5L2 63 aa16.44■□□□□ 0.22
FOXA1-203ENST00000553751 CHST1O43916 411 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 MPIG6BO95866 241 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 NFYBP25208 207 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 CALRP27797 417 aaKnown RBP16.43■□□□□ 0.22
FOXA1-203ENST00000553751 RAB13P51153 203 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 DYNLT3P51808 116 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 RBM39Q14498 530 aaKnown RBP16.43■□□□□ 0.22
FOXA1-203ENST00000553751 HLA-DRB5Q30154 266 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms