RNA–Protein interactions for RNA: ENST00000553628.1

AC009396.1-201, humanhuman

TSL 2 BASIC

Gene AC009396.1, Length 1,079 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009396.1-201ENST00000553628 FAM74A7A6NL05 159 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 LRRN3E7EW58 273 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 RNASEK-C17orf49H0YIS7 233 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 CSTAP01040 98 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 HMGN2P05204 90 aaKnown RBP3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 GKN3PP0CG01 181 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 PRPS2P11908 318 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 FUT3P21217 361 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 CRABP2P29373 138 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 NTSP30990 170 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 ARR3P36575 388 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 PSMD4P55036 377 aaKnown RBP3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 TNFAIP6P98066 277 aaPredicted RBP3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 HOXC5Q00444 222 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 FUT5Q11128 374 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 IFT88Q13099 833 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 TATDN3Q17R31 274 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 DEFB136Q30KP8 78 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 FAM74A3Q4VXF1 159 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 TTMPQ5BVD1 217 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 TNFAIP8L3Q5GJ75 292 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 ZNF678Q5SXM1 525 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 FAM71E1Q6IPT2 247 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 LRRN1Q6UXK5 716 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 TRMT10CQ7L0Y3 403 aaKnown RBP3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 SSX8Q7RTT4 187 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 LRRC28Q86X40 367 aaPredicted RBP3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 IFT20Q8IY31 132 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 DYNAPQ8N1N2 210 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 LINC01561Q8N1V8 128 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 C10orf111Q8N326 155 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 EIF1ADQ8N9N8 165 aaKnown RBP3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 MNS1Q8NEH6 495 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 SLC30A7Q8NEW0 376 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 OR2Z1Q8NG97 314 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 OR4C13Q8NGP0 309 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 AKR7LQ8NHP1 331 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 STAG3L4Q8TBR4 150 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 MYDGFQ969H8 173 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 ZHX1-C8orf76Q96EF9 292 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 SLC41A3Q96GZ6 507 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 OR2M2Q96R28 347 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 CDCA4Q9BXL8 241 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 CENPHQ9H3R5 247 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 OR1A1Q9P1Q5 309 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 PRO0461Q9UI25 63 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 PSME2Q9UL46 239 aa3.42□□□□□ -1.86
AC009396.1-201ENST00000553628 SMIM23A6NLE4 172 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 ZNF879B4DU55 563 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 PLIN3O60664 434 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 UGT2B17O75795 530 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 RAB36O95755 333 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 SNRPAP09012 282 aaKnown RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 PNMTP11086 282 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 ZNF250P15622 560 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 H2AFXP16104 143 aaPredicted RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 VDAC1P21796 283 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 MPIP34949 423 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 PHBP35232 272 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 TGFBR2P37173 567 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 RPL29P47914 159 aaKnown RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 SERPINB9P50453 376 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 ZNF133P52736 654 aaPredicted RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 BLCAPP62952 87 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 SLC35A1P78382 337 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 ZNF45Q02386 682 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 PMS2P3Q13401 168 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 ATXN7L3Q14CW9 347 aaPredicted RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 GGTA1PQ4G0N0 100 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 LRRC23Q53EV4 343 aaPredicted RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 PRAMEF6Q5VXH4 476 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 ZYG11AQ6WRX3 759 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 COMTD1Q86VU5 262 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 TMEM123Q8N131 208 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 C4orf33Q8N1A6 199 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 LRRC18Q8N456 261 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 SPICQ8N5J4 248 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 OR8J1Q8NGP2 316 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 MAGEE2Q8TD90 523 aaPredicted RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 TRUB1Q8WWH5 349 aaKnown RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 MARC2Q969Z3 335 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 SEH1LQ96EE3 360 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 L3HYPDHQ96EM0 354 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 MS4A4EQ96PG1 132 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 OR2V2Q96R30 315 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 OR7D2Q96RA2 312 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 MRPL57Q9BQC6 102 aaKnown RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 PARD6BQ9BYG5 372 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 C20orf27Q9GZN8 174 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 MAGT1Q9H0U3 335 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 VCX2Q9H322 139 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 OR51J1Q9H342 316 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 NANOGQ9H9S0 305 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 RRAGDQ9NQL2 400 aaPredicted RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 PSMC3IPQ9P2W1 217 aaPredicted RBP3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 SLC7A8Q9UHI5 535 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 LGALS13Q9UHV8 139 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 RIMS3Q9UJD0 308 aa3.41□□□□□ -1.86
AC009396.1-201ENST00000553628 DSPPQ9NZW4 1301 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms