RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 FAM90A22PA8MWA6 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM90A12PA8MX19 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM90A5PA8MXJ8 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM90A23PA8MXZ1 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 MCRIP1C9JLW8 97 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 ARG1P05089 322 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FBP1P09467 338 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM90A15PP0C7V4 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM90A13PP0C7W8 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM90A14PP0C7W9 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM90A24PP0C7X0 464 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 ARSBP15848 533 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 CD36P16671 472 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 OMGP23515 440 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 PSMD7P51665 324 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 RPS27AP62979 156 aaKnown RBP18.58■□□□□ 0.56
TDP1-206ENST00000553569 DYNC1I2Q13409 638 aaKnown RBP18.58■□□□□ 0.56
TDP1-206ENST00000553569 MIDNQ504T8 468 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 NKAPLQ5M9Q1 402 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 BAIAP2L2Q6UXY1 529 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 ZFAND2BQ8WV99 257 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 C17orf50Q8WW18 174 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 CYYR1Q96J86 154 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 CHCHD6Q9BRQ6 235 aa18.58■□□□□ 0.56
TDP1-206ENST00000553569 FAM172BPA6NC97 362 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 ZNF729A6NN14 1252 aaPredicted RBP18.57■□□□□ 0.56
TDP1-206ENST00000553569 TMEM14DPA8MWL7 114 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 RAB3BP20337 219 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 GADD45AP24522 165 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 GDNFP39905 211 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 LGALS4P56470 323 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 ACTG1P63261 375 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 QRFPP83859 136 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 PAX5Q02548 391 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 C17orf58Q2M2W7 97 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 SIGIRRQ6IA17 410 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 SLC35E4Q6ICL7 350 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 HEPN1Q6WQI6 88 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 OR51D1Q8NGF3 324 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 DYRK2Q92630 601 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 NICN1Q9BSH3 213 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 TMEM133Q9H2Q1 129 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 ZMAT3Q9HA38 289 aaKnown RBP18.57■□□□□ 0.56
TDP1-206ENST00000553569 ETAA1Q9NY74 926 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 CALYQ9NYX4 217 aa18.57■□□□□ 0.56
TDP1-206ENST00000553569 LOC100506127A0A0U1RQW1 187 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 UBE2QL1A1L167 161 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 PDCD6O75340 191 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 FUT3P21217 361 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 FGF9P31371 208 aaPredicted RBP18.56■□□□□ 0.56
TDP1-206ENST00000553569 RBM39Q14498 530 aaKnown RBP18.56■□□□□ 0.56
TDP1-206ENST00000553569 OR2W3Q7Z3T1 314 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 LDLRAD3Q86YD5 345 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 ZNF565Q8N9K5 539 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 FAM216AQ8WUB2 273 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 CCDC107Q8WV48 283 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 FAM3DQ96BQ1 224 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 NCOR1P1Q9H4R4 102 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 ZNRD1Q9P1U0 126 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 STEAP1Q9UHE8 339 aa18.56■□□□□ 0.56
TDP1-206ENST00000553569 IGHV2-26A0A0B4J1V2 119 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 KBTBD11-OT1A0A1B0GTJ5 212 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 AIPO00170 330 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 IGHV4-59P01825 116 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 PAX6P26367 422 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 LTC4SQ16873 150 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 ZNF497Q6ZNH5 498 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 LHFPL4Q7Z7J7 247 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 SSMEM1Q8WWF3 244 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 NEDD4LQ96PU5 975 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 TM2D1Q9BX74 207 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 CLEC7AQ9BXN2 247 aa18.55■□□□□ 0.56
TDP1-206ENST00000553569 ODF3BA8MYP8 253 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 CLDN34H7C241 214 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 RNASE1P07998 156 aaKnown RBP18.54■□□□□ 0.56
TDP1-206ENST00000553569 NFYBP25208 207 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 SSTR5P35346 364 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 ZNF626Q68DY1 528 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 OR52W1Q6IF63 320 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 OR11H6Q8NGC7 330 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 URM1Q9BTM9 101 aaKnown RBP18.54■□□□□ 0.56
TDP1-206ENST00000553569 RNF167Q9H6Y7 350 aa18.54■□□□□ 0.56
TDP1-206ENST00000553569 A0A0A6YYD4 124 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 IFITM5A6NNB3 132 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 H3BUI4 141 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 IL1AP01583 271 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 MT-ND4P03905 459 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 CGB3P0DN86 165 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 CGB7P0DN87 165 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 CHATP28329 748 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 C2orf76Q3KRA6 126 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 NR2C2APQ86WQ0 139 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 OR4K15Q8NH41 348 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 RFESDQ8TAC1 157 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 AJUBAQ96IF1 538 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 KCTD7Q96MP8 289 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 LPAR5Q9H1C0 372 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 IDI2-AS1Q9NZ38 188 aa18.53■□□□□ 0.56
TDP1-206ENST00000553569 A0A0B4J203 849 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 TMEM272A0A1B0GTI8 110 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms