RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 OR2H2O95918 312 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 IGKV1D-33P01593 117 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 IGKV1-33P01594 117 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 CGB3P0DN86 165 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 CGB7P0DN87 165 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 CALCBP10092 127 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 FUT6P51993 359 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 SNU13P55769 128 aaKnown RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 CDC42P60953 191 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 CXCR4P61073 352 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 AESQ08117 197 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 GPR50Q13585 617 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 EBI3Q14213 229 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 RBM39Q14498 530 aaKnown RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 PNLIPRP3Q17RR3 467 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 CXorf66Q5JRM2 361 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 ZNF322Q6U7Q0 402 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 TMEM179BQ7Z7N9 219 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 FAM58AQ8N1B3 248 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 OR9G1Q8NH87 305 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 APOL4Q9BPW4 351 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 COMMD4Q9H0A8 199 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 PPIL3Q9H2H8 161 aaKnown RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 SLC25A19Q9HC21 320 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 ISYNA1Q9NPH2 558 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 PCDHB16Q9NRJ7 776 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 ACTR3BQ9P1U1 418 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 MRM2Q9UI43 246 aaKnown RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 SIRT4Q9Y6E7 314 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 TMEM14AQ9Y6G1 99 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 VPS13DQ5THJ4 4388 aa5.65□□□□□ -1.51
ATXN3-219ENST00000553488 IGKV1-9A0A0C4DH69 117 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 IGKV1-12A0A0C4DH73 117 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 TRIM64CA6NLI5 447 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 ZNF729A6NN14 1252 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 H3BSH0 61 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 J3QR06 171 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 GATBO75879 557 aaKnown RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 IGKV1D-12P01611 117 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 IGHG4P01861 327 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 HMGN1P05114 100 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 ELANEP08246 267 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 PRKACAP17612 351 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 PSMB8P28062 276 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 VEGFCP49767 419 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 INSL3P51460 131 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 PRRX1P54821 245 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 KIAA0141Q14154 515 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 GK3PQ14409 553 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 HES1Q14469 280 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 HNF4GQ14541 408 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 KPNB1Q14974 876 aaKnown RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 Q6P435 159 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 SSX6Q7RTT6 188 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 CATSPERDQ86XM0 798 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 TGIF2LXQ8IUE1 241 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 IZUMO1Q8IYV9 350 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 OR8H3Q8N146 312 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 Q8N9W7 124 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 OR4D6Q8NGJ1 314 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 GIPC3Q8TF64 312 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 ISOC1Q96CN7 298 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 BORCS8Q96FH0 119 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 CNN2Q99439 309 aaKnown RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 HSPB9Q9BQS6 159 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 ABCG5Q9H222 651 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 PLEKHA1Q9HB21 404 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 ADGRL4Q9HBW9 690 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 HMG20AQ9NP66 347 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 EXOSC4Q9NPD3 245 aaKnown RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 LIN7CQ9NUP9 197 aaKnown RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 ZNF580Q9UK33 172 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 AMMECR1Q9Y4X0 333 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-219ENST00000553488 SNX5Q9Y5X3 404 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
ATXN3-219ENST00000553488 KBTBD11-OT1A0A1B0GTJ5 212 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 FUOMA2VDF0 154 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 I3L521 148 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 SLC33A1O00400 549 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-219ENST00000553488 HSD17B6O14756 317 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 SYT7O43581 403 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 TMEM127O75204 238 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 KDM4BO94953 1096 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 IGHV3-7P01780 117 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 OSMP13725 252 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 SPNP16150 400 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 NFYBP25208 207 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 POU3F4P49335 361 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 RAB7AP51149 207 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 RUNX1Q01196 453 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 ZNF816Q0VGE8 651 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-219ENST00000553488 MADCAM1Q13477 382 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 ATXN7L3Q14CW9 347 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-219ENST00000553488 ODF4Q2M2E3 257 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 KRBOX4Q5JUW0 171 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 TMEM236Q5W0B7 351 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 MEPCEQ7L2J0 689 aaKnown RBP5.63□□□□□ -1.51
ATXN3-219ENST00000553488 SLC35F2Q8IXU6 374 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 DEFB107AQ8IZN7 70 aa5.63□□□□□ -1.51
ATXN3-219ENST00000553488 HS3ST5Q8IZT8 346 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms