RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 RPL36A-HNRNPH2H7BZ11 118 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SGK494L7N484 410 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SSNA1O43805 119 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 ATP6AP2O75787 350 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SC5DO75845 299 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 C1QCP02747 245 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 BPGMP07738 259 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 CSF3P09919 207 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 CPN1P15169 458 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 AREGP15514 252 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 CRHBPP24387 322 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 COILP38432 576 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 MAGEA5P43359 124 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 IDH2P48735 452 aaKnown RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 OR2B8PP59922 312 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 ADARB1P78563 741 aaKnown RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 RBBP4Q09028 425 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 BST1Q10588 318 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 HSPB3Q12988 150 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 PRPSAP1Q14558 356 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 OPCMLQ14982 345 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 CYP51A1Q16850 503 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SLC22A6Q4U2R8 563 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 IFI44LQ53G44 452 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 EIPR1Q53HC9 387 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 COL5A1-AS1Q5SY13 56 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SAMD13Q5VXD3 122 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 EIF5AL1Q6IS14 154 aaKnown RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF774Q6NX45 483 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM205Q6UW68 189 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF620Q6ZNG0 422 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SERPINA12Q8IW75 414 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 PRELID2Q8N945 189 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 ZFP62Q8NB50 900 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 OR5L1Q8NGL2 311 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 OR13C8Q8NGS7 320 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 OR10K1Q8NGX5 313 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 JOSD2Q8TAC2 188 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 FLVCR1-AS1Q8TAF5 88 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF519Q8TB69 540 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 PIGXQ8TBF5 258 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 TFGQ92734 400 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 RCN3Q96D15 328 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 RDH12Q96NR8 316 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 TNFRSF13CQ96RJ3 184 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 S100A13Q99584 98 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SEPHS2Q99611 448 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SDHCQ99643 169 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 GINS4Q9BRT9 223 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 MARVELD1Q9BSK0 173 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 UBE2TQ9NPD8 197 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 ISYNA1Q9NPH2 558 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 OR2S2Q9NQN1 319 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SPRR3Q9UBC9 169 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 MRTO4Q9UKD2 239 aaKnown RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SAMD4AQ9UPU9 718 aaKnown RBP3.94□□□□□ -1.78
ATXN3-218ENST00000553309 SLC35A3Q9Y2D2 325 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 TMED3Q9Y3Q3 217 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 NPTNQ9Y639 398 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 PCNX3Q9H6A9 2034 aa3.94□□□□□ -1.78
ATXN3-218ENST00000553309 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 CADP27708 2225 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 IGLV3-12A0A075B6K2 115 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TRAV26-1A0A087WT03 109 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 A0A087WUJ7 227 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 A0A0A6YYC8 382 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TGIF2-C20orf24A0A0A6YYL0 155 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM213A2RRL7 107 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 H3BN98 237 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 I3L1I5 382 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 GFYI3L273 518 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 M0R036 132 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 EMC8O43402 210 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 OR2T1O43869 369 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 SOX15O60248 233 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TSPAN13O95857 204 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 CFDP00746 253 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PRB2P02812 416 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ARG1P05089 322 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 SNRPCP09234 159 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 SLC2A2P11168 524 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 FUT1P19526 365 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PCMT1P22061 227 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PRKACGP22612 351 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PSMB5P28074 263 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 LOXP28300 417 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PEBP1P30086 187 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 S100A7P31151 101 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 RPA3P35244 121 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 SRP14P37108 136 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 LGALS7P47929 136 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 RAB9AP51151 201 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 SNU13P55769 128 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 NCS1P62166 190 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 RPS4XP62701 263 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 FAM3AP98173 230 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 CDK6Q00534 326 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 AESQ08117 197 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 C2orf80Q0P641 193 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms