RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 GTF2A1P52655 376 aaPredicted RBP9.08□□□□□ -0.96
NEK3-204ENST00000552973 RPL23AP62750 156 aaKnown RBP9.08□□□□□ -0.96
NEK3-204ENST00000552973 RSBN1Q5VWQ0 802 aaPredicted RBP9.08□□□□□ -0.96
NEK3-204ENST00000552973 FAM53AQ6NSI3 398 aaPredicted RBP9.08□□□□□ -0.96
NEK3-204ENST00000552973 ETV3LQ6ZN32 361 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 THNSL2Q86YJ6 484 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 CBR4Q8N4T8 237 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 PARP16Q8N5Y8 322 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 C5orf56Q8N8D9 126 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 UBALD1Q8TB05 177 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 RBMXL1Q96E39 390 aaKnown RBP9.08□□□□□ -0.96
NEK3-204ENST00000552973 MRPL48Q96GC5 212 aaKnown RBP9.08□□□□□ -0.96
NEK3-204ENST00000552973 DUX3Q96PT4 197 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 ERVK13-1Q9NX77 482 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 TAS2R4Q9NYW5 299 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 ING4Q9UNL4 249 aa9.08□□□□□ -0.96
NEK3-204ENST00000552973 AMMECR1Q9Y4X0 333 aaPredicted RBP9.08□□□□□ -0.96
NEK3-204ENST00000552973 NOTCH3Q9UM47 2321 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 LINC01548A6NM66 108 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 TMEM212A6NML5 194 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 NUDT19A8MXV4 375 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 NPIPB11E5RHQ5 1161 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 E9PQ18 207 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 H3BNX3 289 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 MAGEB3O15480 346 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 CDRT1O95170 752 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 FADS2O95864 444 aaKnown RBP9.07□□□□□ -0.96
NEK3-204ENST00000552973 THBS3P49746 956 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 GBX2P52951 348 aaPredicted RBP9.07□□□□□ -0.96
NEK3-204ENST00000552973 MADCAM1Q13477 382 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 IL13RA2Q14627 380 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 RSU1Q15404 277 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 ELP2Q6IA86 826 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 OR2W3Q7Z3T1 314 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 MOB3BQ86TA1 216 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 SYS1Q8N2H4 156 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 SUMF2Q8NBJ7 301 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 PXT1Q8NFP0 134 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 OR51D1Q8NGF3 324 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 OR52I1Q8NGK6 324 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 OR10X1Q8NGY0 326 aa9.07□□□□□ -0.96
NEK3-204ENST00000552973 NCBP2LA6PVI3 153 aaKnown RBP9.06□□□□□ -0.96
NEK3-204ENST00000552973 RPSAP08865 295 aaKnown RBP9.06□□□□□ -0.96
NEK3-204ENST00000552973 RAB7AP51149 207 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 EGFEM1PQ0D2K5 195 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 XAF1Q6GPH4 301 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 SLC35E3Q7Z769 313 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 KLHL30-AS1Q8NEE0 82 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 RHOXF1Q8NHV9 184 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 HAVCR2Q8TDQ0 301 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 CHPT1Q8WUD6 406 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 CCDC107Q8WV48 283 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 RGP1Q92546 391 aaPredicted RBP9.06□□□□□ -0.96
NEK3-204ENST00000552973 DPF1Q92782 380 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 ORAI1Q96D31 301 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 SLC29A1Q99808 456 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 DPCDQ9BVM2 203 aaPredicted RBP9.06□□□□□ -0.96
NEK3-204ENST00000552973 JAM3Q9BX67 310 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 PCDHB16Q9NRJ7 776 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 ST3GAL6Q9Y274 331 aa9.06□□□□□ -0.96
NEK3-204ENST00000552973 IGHV3-43A0A0B4J1X8 118 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 IGHV1-3A0A0C4DH29 117 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 CCRL2O00421 344 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 HSD17B6O14756 317 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 OR7C1O76099 320 aaPredicted RBP9.05□□□□□ -0.96
NEK3-204ENST00000552973 IGHV3-43DP0DP04 118 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 MYCNOSP40205 109 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 RAB25P57735 213 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 SLC35B1P78383 322 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 CD69Q07108 199 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 ATAD3CQ5T2N8 411 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 ZNF529Q6P280 563 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 LCNL1Q6ZST4 164 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 OR8H3Q8N146 312 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 STPG2Q8N412 459 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 ARL11Q969Q4 196 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 CPNE2Q96FN4 548 aaPredicted RBP9.05□□□□□ -0.96
NEK3-204ENST00000552973 Q96MT0 163 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 MYCBPQ99417 103 aaPredicted RBP9.05□□□□□ -0.96
NEK3-204ENST00000552973 NCOR1P1Q9H4R4 102 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 LINC00574Q9H8X3 128 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 FAM118AQ9NWS6 357 aa9.05□□□□□ -0.96
NEK3-204ENST00000552973 LOC100130705A0A1B0GUX0 176 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 A0A1W2PP11 408 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 GEMIN2O14893 280 aaKnown RBP9.04□□□□□ -0.96
NEK3-204ENST00000552973 FGF16O43320 207 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 IGHG2P01859 326 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 GAPDHP04406 335 aaKnown RBP9.04□□□□□ -0.96
NEK3-204ENST00000552973 LIMS3P0CW19 117 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 LIMS4P0CW20 117 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 SERPINA2P20848 420 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 KCNJ3P48549 501 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 RAB40BQ12829 278 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 MRPL28Q13084 256 aaKnown RBP9.04□□□□□ -0.96
NEK3-204ENST00000552973 SMN1Q16637 294 aaKnown RBP9.04□□□□□ -0.96
NEK3-204ENST00000552973 ASCL4Q6XD76 172 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 FOXRED2Q8IWF2 684 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 Q8NFD4 153 aa9.04□□□□□ -0.96
NEK3-204ENST00000552973 OR52N1Q8NH53 320 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms