RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	LIME1	Q9H400	295 aa		10.64	□□□□□ -0.71
CACNB3-223	ENST00000552480	C5orf66	Q9H5L9	145 aa		10.64	□□□□□ -0.71
CACNB3-223	ENST00000552480	MBNL3	Q9NUK0	354 aa	Known RBP	10.64	□□□□□ -0.71
CACNB3-223	ENST00000552480	TRAPPC2L	Q9UL33	140 aa		10.64	□□□□□ -0.71
CACNB3-223	ENST00000552480	C14orf166	Q9Y224	244 aa	Known RBP	10.64	□□□□□ -0.71
CACNB3-223	ENST00000552480	ATRX	P46100	2492 aa		10.64	□□□□□ -0.71
CACNB3-223	ENST00000552480	CACNA1B	Q00975	2339 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	MEIKIN	A0A087WXM9	373 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZNF737	O75373	536 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	DIRAS3	O95661	229 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	HLA-A	P01891	365 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	TK1	P04183	234 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	CTSD	P07339	412 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZNF728	P0DKX0	622 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	ANXA3	P12429	323 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	MUC1	P15941	1255 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	AKR1C4	P17516	323 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	RCC1	P18754	421 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	AADAC	P22760	399 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	RBMX	P38159	391 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	GABRA2	P47869	451 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	EIF2B2	P49770	351 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	PPOX	P50336	477 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	UCP3	P55916	312 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	HERV-K104	P61576	105 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	SEC61A1	P61619	476 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	DHODH	Q02127	395 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	PPP1R1A	Q13522	171 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	HERPUD1	Q15011	391 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	HMGN3	Q15651	99 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	STUM	Q69YW2	141 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	C1orf87	Q8N0U7	546 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	ASCC1	Q8N9N2	400 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	OR5T2	Q8NGG2	359 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	ANGPTL6	Q8NI99	470 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	TMEM230	Q96A57	120 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	MOB3A	Q96BX8	217 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	COQ2	Q96H96	371 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	FYTTD1	Q96QD9	318 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	TMPRSS13	Q9BYE2	586 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	SHARPIN	Q9H0F6	387 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	MGAT4C	Q9UBM8	478 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	FBXO9	Q9UK97	447 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	PCDHB10	Q9UN67	800 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	ACACB	O00763	2458 aa		10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	MAP1B	P46821	2468 aa	Known RBP	10.63	□□□□□ -0.71
CACNB3-223	ENST00000552480	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	IGKV1-6	A0A0C4DH72	117 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	C9orf170	A2RU37	121 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	OOEP	A6NGQ2	149 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	NPIPB11	E5RHQ5	1161 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	BET1	O15155	118 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	PPY	P01298	95 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	PRB1	P04280	392 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	CXCL3	P19876	107 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	NFYA	P23511	347 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	AES	Q08117	197 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	BAMBI	Q13145	260 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZFP69	Q49AA0	526 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	TMEM128	Q5BJH2	165 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	FAM201A	Q5SY85	155 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	C6orf183	Q5T699	404 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZNF561	Q8N587	486 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	OR2AK2	Q8NG84	335 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	TOMM40L	Q969M1	308 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	SDSL	Q96GA7	329 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	DMRTB1	Q96MA1	342 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	KCNIP1	Q9NZI2	227 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	SLC23A1	Q9UHI7	598 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	KIF25	Q9UIL4	384 aa		10.62	□□□□□ -0.71
CACNB3-223	ENST00000552480	SPTA1	P02549	2419 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	TRBV6-7	A0A0A0MS04	114 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	FAM172BP	A6NC97	362 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	TMEM178B	H3BS89	294 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	C19orf84	I3L1E1	186 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	LGALS8	O00214	317 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	MGST3	O14880	152 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	TUSC2	O75896	110 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZNF205	O95201	554 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	SFT2D2	O95562	160 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	IGFBP2	P18065	325 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	CD34	P28906	385 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	FXYD4	P59646	89 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	IL13RA1	P78552	427 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	KRBOX4	Q5JUW0	171 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	TRAT1	Q6PIZ9	186 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	C5orf24	Q7Z6I8	188 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	TGIF2LY	Q8IUE0	185 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	SLC38A6	Q8IZM9	456 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZNF843	Q8N446	348 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	MITD1	Q8WV92	249 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	RSRP1	Q9BUV0	290 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	TMEM106B	Q9NUM4	274 aa		10.61	□□□□□ -0.71
CACNB3-223	ENST00000552480	TPR	P12270	2363 aa	Known RBP	10.6	□□□□□ -0.71
CACNB3-223	ENST00000552480	CAD	P27708	2225 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms