RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 C1orf185Q5T7R7 199 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 FOXRED2Q8IWF2 684 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 LHFPL5Q8TAF8 219 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 SLC5A7Q9GZV3 580 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 CXXC4Q9H2H0 198 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 SLC25A15Q9Y619 301 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 IGHV3-64DA0A0J9YX35 117 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 A0A1B0GW55 424 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 PROB1E7EW31 1015 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 SIRPB1O00241 398 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 SH2D1BO14796 132 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 DUX4L2P0CJ85 424 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 DUX4L3P0CJ86 424 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 DUX4L4P0CJ87 422 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 DUX4L5P0CJ88 424 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 DUX4L6P0CJ89 424 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 DUX4L7P0CJ90 424 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 HKR1P10072 659 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 EIF2S3LQ2VIR3 472 aaKnown RBP11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF718Q3SXZ3 478 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 TBC1D26Q86UD7 250 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 CCDC28AQ8IWP9 274 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 C1orf174Q8IYL3 243 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 CABLES2Q9BTV7 478 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 DUX4Q9UBX2 424 aa11.88□□□□□ -0.51
RAB3IP-216ENST00000552199 AKAP13Q12802 2813 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 SVILO95425 2214 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 TIMM8AO60220 97 aaPredicted RBP11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 FABP6P51161 128 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 SRPXP78539 464 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 MBNL2Q5VZF2 373 aaKnown RBP11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF324BQ6AW86 544 aaPredicted RBP11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF497Q6ZNH5 498 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 C11orf53Q8IXP5 236 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 GAPTQ8N292 157 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 RPRMLQ8N4K4 120 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 PLPPR1Q8TBJ4 325 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 TMEM222Q9H0R3 208 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 HES4Q9HCC6 221 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 LUZP4Q9P127 313 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 WASF3Q9UPY6 502 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 TMED3Q9Y3Q3 217 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 LSM5Q9Y4Y9 91 aaKnown RBP11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 GVINP1Q7Z2Y8 2422 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 PRR14LQ5THK1 2151 aa11.87□□□□□ -0.51
RAB3IP-216ENST00000552199 CEP250Q9BV73 2442 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 CFAP47Q6ZTR5 3102 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 MKRN2OSH3BPM6 223 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 MBPP02686 304 aaPredicted RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 GCH1P30793 250 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 TIMP3P35625 211 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 KRTCAP3Q53RY4 240 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF474Q6S9Z5 364 aaPredicted RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 Q6ZR03 302 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 MOB1BQ7L9L4 216 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 HSD17B13Q7Z5P4 300 aaPredicted RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 H1FOOQ8IZA3 346 aaPredicted RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 EIF4E3Q8N5X7 224 aaKnown RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 CCL28Q9NRJ3 127 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 FZR1Q9UM11 496 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 UBE2J1Q9Y385 318 aaPredicted RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 SESN1Q9Y6P5 492 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 A8MXK9 166 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 HSD17B6O14756 317 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 TAAR5O14804 337 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 FGF2P09038 288 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 RPL12P30050 165 aaKnown RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 MEX3BQ6ZN04 569 aaKnown RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 SLC35G3Q8N808 338 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 SPERTQ8NA61 448 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 TMEM56Q96MV1 263 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 TLNRD1Q9H1K6 362 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 BARX1Q9HBU1 254 aaPredicted RBP11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 OR2W1Q9Y3N9 320 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 TMEM56-RWDD3S4R434 201 aa11.86□□□□□ -0.51
RAB3IP-216ENST00000552199 NPIPB11E5RHQ5 1161 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 TEX46H3BTG2 121 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 K7EPK0 472 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 FAM71E2Q8N5Q1 922 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 BVESQ8NE79 360 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 LRRC20Q8TCA0 184 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 KIRREL1Q96J84 757 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 ZC4H2Q9NQZ6 224 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 ZFP57Q9NU63 452 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
RAB3IP-216ENST00000552199 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 E5RGE8 158 aa11.84□□□□□ -0.51
RAB3IP-216ENST00000552199 HAND1O96004 215 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms