RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 ISL1P61371 349 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 ZNF816Q0VGE8 651 aaPredicted RBP11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 EBI3Q14213 229 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 CDK5R1Q15078 307 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 TP53I3Q53FA7 332 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 MOB3BQ86TA1 216 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 IZUMO1Q8IYV9 350 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 OR13C3Q8NGS6 347 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 OR2G2Q8NGZ5 317 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 OR2T10Q8NGZ9 312 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 RCHY1Q96PM5 261 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 SORL1Q92673 2214 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 DNAH1Q9P2D7 4330 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 IGHV1-3A0A0C4DH29 117 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 NPIPB11E5RHQ5 1161 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 TMEM225BP0DP42 221 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 DBTP11182 482 aaKnown RBP11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 VDAC1P21796 283 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 EPHA2P29317 976 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 MTNR1BP49286 362 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 TMED1Q13445 227 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 FHL3Q13643 280 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 KCTD20Q7Z5Y7 419 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 RFESDQ8TAC1 157 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 RFKQ969G6 155 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 UTP4Q969X6 686 aaKnown RBP11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 MYRFQ9Y2G1 1151 aa11.11□□□□□ -0.63
CHMP1A-210ENST00000551981 TCRBV3S1A0A5B6 114 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 G3V2T6 193 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 IGHG4P01861 327 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 HCKP08631 526 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 T-ENOLP0DO92 83 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 KCNJ3P48549 501 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 ZNF85Q03923 595 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 FAM27D1Q5T7N8 215 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 Q8N6K4 173 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 OR11H1Q8NG94 326 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 CNIH3Q8TBE1 160 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 MRGPRDQ8TDS7 321 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 NR1H4Q96RI1 486 aaPredicted RBP11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 ZCCHC4Q9H5U6 513 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 FAM118AQ9NWS6 357 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 FRRS1LQ9P0K9 344 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
CHMP1A-210ENST00000551981 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 TRAV24A0A0B4J272 114 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 A0A1W2PPE3 182 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 ATP8B1O43520 1251 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 HTR1AP08908 422 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 OR5H8P0DN80 308 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 IL3RAP26951 378 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 SSTR5P35346 364 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 REG1BP48304 166 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 CCR9P51686 369 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 PAX5Q02548 391 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 KISS1Q15726 138 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 KDM4DQ6B0I6 523 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 ELP2Q6IA86 826 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 FDX2Q6P4F2 183 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 Q8N9W7 124 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 OR8H1Q8NGG4 311 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 CPNE2Q96FN4 548 aaPredicted RBP11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 STARD9Q9P2P6 4700 aa11.09□□□□□ -0.63
CHMP1A-210ENST00000551981 LCE6AA0A183 80 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 SLC16A6O15403 523 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 SULT1B1O43704 296 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 MOSP00540 346 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 CD1BP29016 333 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 SOX6P35712 828 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 GYS2P54840 703 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 NANOS3P60323 173 aaKnown RBP11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 ZP1P60852 638 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 CFHR3Q02985 330 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 IL13RA2Q14627 380 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 RSBN1Q5VWQ0 802 aaPredicted RBP11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 ZDHHC13Q8IUH4 622 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 OR51A4Q8NGJ6 313 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 OR5D14Q8NGL3 314 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 OR10AC1Q8NH08 325 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 S1PR3Q99500 378 aa11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 CHCHD3Q9NX63 227 aaKnown RBP11.08□□□□□ -0.64
CHMP1A-210ENST00000551981 DAPL1A0PJW8 107 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 RPSAP08865 295 aaKnown RBP11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 GZMHP20718 246 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 PSMB8P28062 276 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 DNAL1Q4LDG9 190 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 ZNF691Q5VV52 312 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 TMEM65Q6PI78 240 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 SERPINA12Q8IW75 414 aa11.07□□□□□ -0.64
CHMP1A-210ENST00000551981 C8orf31Q8N9H6 132 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms