RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 KCTD7Q96MP8 289 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 GFI1Q99684 422 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 CHCHD6Q9BRQ6 235 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 TMEM59Q9BXS4 323 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 PRDM13Q9H4Q3 707 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 STEAP1Q9UHE8 339 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 KIF25Q9UIL4 384 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 SOX21Q9Y651 276 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-225ENST00000551845 LOC100506127A0A0U1RQW1 187 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 KBTBD11-OT1A0A1B0GTJ5 212 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 SHISA3A0PJX4 238 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 TMEM30CPA0ZSE6 113 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 MEIOCA2RUB1 952 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF729A6NN14 1252 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-225ENST00000551845 IFITM5A6NNB3 132 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 TMEM14DPA8MWL7 114 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 CA11O75493 328 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 PAHP00439 452 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 MT-ND4P03905 459 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 COX7A1P24310 79 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 CFPP27918 469 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 CLDN12P56749 244 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 QRFPP83859 136 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 KLRD1Q13241 179 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 TUSC1Q2TAM9 212 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 MIDNQ504T8 468 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 HES5Q5TA89 166 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 RSBN1Q5VWQ0 802 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-225ENST00000551845 HCP5Q6MZN7 132 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 HEPN1Q6WQI6 88 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 Q6YL49 198 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF782Q6ZMW2 699 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-225ENST00000551845 PNKDQ8N490 385 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 PLPPR1Q8TBJ4 325 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 ZFAND2BQ8WV99 257 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF48Q96MX3 618 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-225ENST00000551845 TM2D1Q9BX74 207 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 ETAA1Q9NY74 926 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF581Q9P0T4 197 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 SESN1Q9Y6P5 492 aa8.67□□□□□ -1.02
PTCH1-225ENST00000551845 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 A0A0U1RQK1 487 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 UBE2QL1A1L167 161 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 TRIM64CA6NLI5 447 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 NOTOA8MTQ0 251 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 PDCD6O75340 191 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 FBP1P09467 338 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 CGB3P0DN86 165 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 CGB7P0DN87 165 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 GADD45AP24522 165 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 CDK2P24941 298 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 BLVRBP30043 206 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-225ENST00000551845 SDC2P34741 201 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 OR10A3P58181 314 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 DYNC1I2Q13409 638 aaKnown RBP8.66□□□□□ -1.02
PTCH1-225ENST00000551845 NKAPLQ5M9Q1 402 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 SIGIRRQ6IA17 410 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 TCF23Q7RTU1 214 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 RTN4RL2Q86UN3 420 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 ABHD12Q8N2K0 398 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 ZDHHC22Q8N966 263 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 OR11H6Q8NGC7 330 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 OR13A1Q8NGR1 328 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 MRGPRDQ8TDS7 321 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 CCDC107Q8WV48 283 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 TMEM133Q9H2Q1 129 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 PLEKHJ1Q9NW61 149 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 RCC2Q9P258 522 aaKnown RBP8.66□□□□□ -1.02
PTCH1-225ENST00000551845 FBLN5Q9UBX5 448 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 TRAPPC2LQ9UL33 140 aa8.66□□□□□ -1.02
PTCH1-225ENST00000551845 DOCK11Q5JSL3 2073 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 MDFIC2A0A1B0GVS7 189 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 METTL21EPA6NDL7 271 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 CLDN34H7C241 214 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 AIPO00170 330 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 TOR1AO14656 332 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 HOXA3O43365 443 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-225ENST00000551845 ORC5O43913 435 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 AIREO43918 545 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 MMP23AO75900 390 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 CLPXO76031 633 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 ARG1P05089 322 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 OMGP23515 440 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 SAA4P35542 130 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 GLP1RP43220 463 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 PRRX1P54821 245 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 UNC119Q13432 240 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 SLC9A3R2Q15599 337 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 C17orf58Q2M2W7 97 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF497Q6ZNH5 498 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 Q6ZTK2 550 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 FAM89BQ8N5H3 189 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 OR10A7Q8NGE5 316 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 RFESDQ8TAC1 157 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 FAM216AQ8WUB2 273 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 YIPF6Q96EC8 236 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 MALSU1Q96EH3 234 aa8.65□□□□□ -1.02
PTCH1-225ENST00000551845 FAAP24Q9BTP7 215 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms