RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 SCAF4O95104 1147 aaKnown RBP20.29■□□□□ 0.84
NPAS3-211ENST00000551634 HOXA5P20719 270 aa20.29■□□□□ 0.84
NPAS3-211ENST00000551634 IL24Q13007 206 aa20.29■□□□□ 0.84
NPAS3-211ENST00000551634 AKR1C8PQ5T2L2 129 aa20.29■□□□□ 0.84
NPAS3-211ENST00000551634 OR10D3Q8NH80 312 aa20.29■□□□□ 0.84
NPAS3-211ENST00000551634 SIRT7Q9NRC8 400 aa20.29■□□□□ 0.84
NPAS3-211ENST00000551634 PIGBOS1A0A0B4J2F0 54 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 RPS10P46783 165 aaKnown RBP20.28■□□□□ 0.84
NPAS3-211ENST00000551634 UBE2KP61086 200 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 MPV17LQ2QL34 196 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 SDK2Q58EX2 2172 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 OR5D13Q8NGL4 314 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 CPNE4Q96A23 557 aaPredicted RBP20.28■□□□□ 0.84
NPAS3-211ENST00000551634 UBE2ZQ9H832 354 aaPredicted RBP20.28■□□□□ 0.84
NPAS3-211ENST00000551634 TAGLN2P37802 199 aaKnown RBP20.28■□□□□ 0.84
NPAS3-211ENST00000551634 ICAM4Q14773 271 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 CMTM1Q8IZ96 169 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 PLPPR1Q8TBJ4 325 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 IFI44Q8TCB0 444 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 LIPGQ9Y5X9 500 aa20.28■□□□□ 0.84
NPAS3-211ENST00000551634 TMEM50AO95807 157 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 SCTP09683 121 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 KIAA0141Q14154 515 aaPredicted RBP20.27■□□□□ 0.84
NPAS3-211ENST00000551634 ZNF429Q86V71 674 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 CNTRLQ7Z7A1 2325 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 H0Y980 276 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 CST7O76096 145 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 BCL3P20749 454 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 PI4KAP42356 2102 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 HAGHQ16775 308 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 TVP23CQ96ET8 276 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 ATP5SQ99766 215 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 WSB1Q9Y6I7 421 aa20.27■□□□□ 0.84
NPAS3-211ENST00000551634 WRBO00258 174 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 CYTIPO60759 359 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 IGHV2-70P01814 119 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 KHDC3LQ587J8 217 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 REPIN1Q9BWE0 567 aaKnown RBP20.26■□□□□ 0.83
NPAS3-211ENST00000551634 MRPS18CQ9Y3D5 142 aaKnown RBP20.26■□□□□ 0.83
NPAS3-211ENST00000551634 ATP23Q9Y6H3 246 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 CHST1O43916 411 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 TAS2R30P59541 319 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 TRA2AQ13595 282 aaKnown RBP eCLIP20.26■□□□□ 0.83
NPAS3-211ENST00000551634 HERPUD1Q15011 391 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 HLA-BQ31612 363 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 CPEB3Q8NE35 698 aaKnown RBP20.26■□□□□ 0.83
NPAS3-211ENST00000551634 OR10G4Q8NGN3 311 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 TMEM45BQ96B21 275 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 NIPSNAP3BQ9BS92 247 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 TOLLIPQ9H0E2 274 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 IGKV1D-13A0A0B4J2D9 117 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 A0A0G2JMM0 328 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 A0A1W2PPB8 328 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 A0A1W2PRS3 328 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 KIR3DP1A8MWS1 328 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 DFFBO76075 338 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 IGKV1-13P0DP09 117 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 SLC35E3Q7Z769 313 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 OR56B2PQ8NGI1 322 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 CLDND2Q8NHS1 167 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 GTF3AQ92664 365 aaKnown RBP20.26■□□□□ 0.83
NPAS3-211ENST00000551634 RIMS4Q9H426 269 aaPredicted RBP20.26■□□□□ 0.83
NPAS3-211ENST00000551634 RNF115Q9Y4L5 304 aa20.26■□□□□ 0.83
NPAS3-211ENST00000551634 TRAV1-1A0A0B4J248 108 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 FOLR3P41439 243 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 CDX1P47902 265 aaPredicted RBP20.25■□□□□ 0.83
NPAS3-211ENST00000551634 DLK1P80370 383 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 NCMAPQ5T1S8 102 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 CDCP2Q5VXM1 449 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 SLC25A6P12236 298 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 PRDX4Q13162 271 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 RNPS1Q15287 305 aaKnown RBP20.25■□□□□ 0.83
NPAS3-211ENST00000551634 ELOBQ15370 118 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 CCL28Q9NRJ3 127 aa20.25■□□□□ 0.83
NPAS3-211ENST00000551634 EPHA1P21709 976 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 BATF2Q8N1L9 274 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 TMEM217Q8N7C4 229 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 CYB561D1Q8N8Q1 229 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 TRAV20A0A0B4J274 112 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 H0YL77 283 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 IGHEP01854 428 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 S100GP29377 79 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 HAAOP46952 286 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 PAX9P55771 341 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 CEACAM21Q3KPI0 293 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 MKXQ8IYA7 352 aa20.24■□□□□ 0.83
NPAS3-211ENST00000551634 LRRC3CA6NJW4 275 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 ZNF727A8MUV8 499 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 RUNX1Q01196 453 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 FAM209BQ5JX69 171 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 ACER2Q5QJU3 275 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 STX12Q86Y82 276 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 MMP24Q9Y5R2 645 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 B4DEV8 164 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 PGLYRP1O75594 196 aaPredicted RBP20.23■□□□□ 0.83
NPAS3-211ENST00000551634 RFPL3SP0C7P2 107 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 ZNF154Q13106 437 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 GGACTQ9BVM4 153 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 TAAR3PQ9P1P4 343 aa20.23■□□□□ 0.83
NPAS3-211ENST00000551634 CCL4P13236 92 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms