RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 HMGN1P05114 100 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 GNAO1P09471 354 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 MUC1P15941 1255 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-214ENST00000550893 CCL3L1P16619 93 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 HSD11B1P28845 292 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SRP14P37108 136 aaKnown RBP3.89□□□□□ -1.79
SCAF11-214ENST00000550893 NPBWR2P48146 333 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 ALDH3A2P51648 485 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 OR12D2P58182 307 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 GNB2P62879 340 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 CEACAM21Q3KPI0 293 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 C6orf141Q5SZD1 244 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SIGIRRQ6IA17 410 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 METAP1DQ6UB28 335 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-214ENST00000550893 C17orf107Q6ZR85 190 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 KCTD8Q6ZWB6 473 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 VMO1Q7Z5L0 202 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 KIR3DL3Q8N743 410 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 ZNRF1Q8ND25 227 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 OR8B3Q8NGG8 313 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 OR2G2Q8NGZ5 317 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 RHOXF1Q8NHV9 184 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 NANPQ8TBE9 248 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 FAM81AQ8TBF8 368 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 ST8SIA4Q92187 359 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SGCDQ92629 289 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 C12orf43Q96C57 262 aaKnown RBP3.89□□□□□ -1.79
SCAF11-214ENST00000550893 TECTBQ96PL2 329 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 OR8B2Q96RD0 313 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 CHST5Q9GZS9 411 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SLC22A4Q9H015 551 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 RIBC2Q9H4K1 309 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 FN3KRPQ9HA64 309 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SEBOXQ9HB31 216 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-214ENST00000550893 S100A14Q9HCY8 104 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SCRT2Q9NQ03 307 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SIRT7Q9NRC8 400 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 CLN8Q9UBY8 286 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 OR5V1Q9UGF6 321 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 LAMP5Q9UJQ1 280 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 OR52A1Q9UKL2 312 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 TCF19Q9Y242 345 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 MPC1Q9Y5U8 109 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 IGHV1-69DA0A0B4J2H0 117 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ACOD1A6NK06 481 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 A6NLC8 198 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 OR2AT4A6NND4 320 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 DHRS7CA6NNS2 312 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF732B4DXR9 585 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 LOC110117498-PIK3R3F6TDL0 507 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 J3QT63 122 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ENSAO43768 121 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF254O75437 659 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 IGHV1-69P01742 117 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 DBTP11182 482 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PCMT1P22061 227 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PAICSP22234 425 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 CPT2P23786 658 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 BMXP51813 675 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 RIDAP52758 137 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 CAV3P56539 151 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 GMFBP60983 142 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 RPS11P62280 158 aaKnown RBP eCLIP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ARF6P62330 175 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ADARB1P78563 741 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 CDK5R1Q15078 307 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ARMCX4Q5H9R4 360 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 METTL11BQ5VVY1 283 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 HAGHLQ6PII5 290 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 CCBE1Q6UXH8 406 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 KRT77Q7Z794 578 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 RTN4RL2Q86UN3 420 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ANGPTL5Q86XS5 388 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 GID4Q8IVV7 300 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PDZD9Q8IXQ8 264 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 OR51A2Q8NGJ7 313 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 OR52I1Q8NGK6 324 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 OR8J1Q8NGP2 316 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 OR13C5Q8NGS8 318 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 OR5R1Q8NH85 324 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PIGCQ92535 297 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 RBMXL1Q96E39 390 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 COQ2Q96H96 371 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PGLYRP3Q96LB9 341 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 DUX3Q96PT4 197 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PCGF1Q9BSM1 259 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 RTL8AQ9BWD3 113 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 DNTTIP1Q9H147 329 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 YY1AP1Q9H869 796 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 MOB1AQ9H8S9 216 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 AMBNQ9NP70 447 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PCDHB16Q9NRJ7 776 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 RBFOX1Q9NWB1 397 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 FKBP14Q9NWM8 211 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PAK1IP1Q9NWT1 392 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 WARS2Q9UGM6 360 aaKnown RBP3.88□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF391Q9UJN7 358 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 PIGLQ9Y2B2 252 aa3.88□□□□□ -1.79
SCAF11-214ENST00000550893 KPTNQ9Y664 436 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms