RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ZNF714Q96N38 554 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 BEX2Q9BXY8 128 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 METTL8Q9H825 291 aaKnown RBP17.65■□□□□ 0.42
NEK3-202ENST00000550841 OPN4Q9UHM6 478 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 KIF25Q9UIL4 384 aa17.65■□□□□ 0.42
NEK3-202ENST00000550841 SMIM31A0A1B0GVY4 71 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 UBE2QL1A1L167 161 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 H3BMQ9 156 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 ZNF701M0R085 212 aaPredicted RBP17.64■□□□□ 0.41
NEK3-202ENST00000550841 RBP4P02753 201 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 MT-ND4P03905 459 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 GZMHP20718 246 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 PLA2G7Q13093 441 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 SPCS2Q15005 226 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 ZNF497Q6ZNH5 498 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 C6orf201Q7Z4U5 140 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 UPRTQ96BW1 309 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 RAB3CQ96E17 227 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 PCGF1Q9BSM1 259 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 FAAP24Q9BTP7 215 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 SIRPDQ9H106 197 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 GAL3ST2Q9H3Q3 398 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 RIMS4Q9H426 269 aaPredicted RBP17.64■□□□□ 0.41
NEK3-202ENST00000550841 RHBDL2Q9NX52 303 aa17.64■□□□□ 0.41
NEK3-202ENST00000550841 FOXI3A8MTJ6 420 aaPredicted RBP17.63■□□□□ 0.41
NEK3-202ENST00000550841 MMP9P14780 707 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 SRP14P37108 136 aaKnown RBP17.63■□□□□ 0.41
NEK3-202ENST00000550841 TMEM50BP56557 158 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 ZNF273Q14593 569 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 OR5H6Q8NGV6 325 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 CMTM3Q96MX0 182 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 SULT4A1Q9BR01 284 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 DIABLOQ9NR28 239 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 RSL24D1Q9UHA3 163 aaKnown RBP17.63■□□□□ 0.41
NEK3-202ENST00000550841 ZANQ9Y493 2812 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 DSCAML1Q8TD84 2053 aa17.63■□□□□ 0.41
NEK3-202ENST00000550841 A0A0A6YYH2 397 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 A6NJ64 397 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 ZNF729A6NN14 1252 aaPredicted RBP17.62■□□□□ 0.41
NEK3-202ENST00000550841 C17orf98A8MV24 154 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 INAFM1C9JVW0 142 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 RAB27BO00194 218 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 AVPP01185 164 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 PRTN3P24158 256 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 GAPTQ8N292 157 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 S100A16Q96FQ6 103 aaKnown RBP17.62■□□□□ 0.41
NEK3-202ENST00000550841 ARHGAP5-AS1Q96IT6 56 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 PECRQ9BY49 303 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 UNKLQ9H9P5 680 aaKnown RBP17.62■□□□□ 0.41
NEK3-202ENST00000550841 RAB9BQ9NP90 201 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 TRAPPC2LQ9UL33 140 aa17.62■□□□□ 0.41
NEK3-202ENST00000550841 POM121CA8CG34 1229 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 CCL3L1P16619 93 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 BPIFB3P59826 476 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 ERVFRD-1P60508 538 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 MRPS15P82914 257 aaKnown RBP17.61■□□□□ 0.41
NEK3-202ENST00000550841 SCGB2A2Q13296 93 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 CHRFAM7AQ494W8 412 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 KIAA2026Q5HYC2 2103 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 UBE2NLQ5JXB2 153 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 NCR3LG1Q68D85 454 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 TRAT1Q6PIZ9 186 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 C1orf229Q6ZS94 237 aaPredicted RBP17.61■□□□□ 0.41
NEK3-202ENST00000550841 VMO1Q7Z5L0 202 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 PRIMA1Q86XR5 153 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 Q8N7P7 452 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 RBM38Q9H0Z9 239 aaKnown RBP17.61■□□□□ 0.41
NEK3-202ENST00000550841 ABCG5Q9H222 651 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 HEXA-AS1Q9H8Q6 139 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 COMMD3Q9UBI1 195 aa17.61■□□□□ 0.41
NEK3-202ENST00000550841 SERPINE3A8MV23 424 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 GLP1RP43220 463 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 DLX6P56179 175 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 GUCA2AQ02747 115 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 PLAC9Q5JTB6 97 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 C6orf183Q5T699 404 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 GPR157Q5UAW9 335 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 TCF23Q7RTU1 214 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 SAMD12Q8N8I0 201 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 DYNC2LI1Q8TCX1 351 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 DGCR14Q96DF8 476 aaKnown RBP17.6■□□□□ 0.41
NEK3-202ENST00000550841 TBX15Q96SF7 602 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 KCNIP1Q9NZI2 227 aa17.6■□□□□ 0.41
NEK3-202ENST00000550841 CCDC59Q9P031 241 aaKnown RBP17.6■□□□□ 0.41
NEK3-202ENST00000550841 KBTBD11-OT1A0A1B0GTJ5 212 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 HIST1H1DP16402 221 aaKnown RBP17.59■□□□□ 0.41
NEK3-202ENST00000550841 MOGAT2Q3SYC2 334 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 OR52W1Q6IF63 320 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 C11orf42Q8N5U0 333 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 OR13A1Q8NGR1 328 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 MRGPRDQ8TDS7 321 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 CCDC107Q8WV48 283 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 SLC25A38Q96DW6 304 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 CMSS1Q9BQ75 279 aaKnown RBP17.59■□□□□ 0.41
NEK3-202ENST00000550841 CHMP1AQ9HD42 196 aaPredicted RBP17.59■□□□□ 0.41
NEK3-202ENST00000550841 AK3Q9UIJ7 227 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 NUP50Q9UKX7 468 aa17.59■□□□□ 0.41
NEK3-202ENST00000550841 MEX3AA1L020 520 aaKnown RBP17.58■□□□□ 0.4
NEK3-202ENST00000550841 ORC5O43913 435 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 CRLF1O75462 422 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms