RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 RNF114Q9Y508 228 aa13.94□□□□□ -0.18
CHMP1A-208ENST00000550102 TMEM30CPA0ZSE6 113 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM172BPA6NC97 362 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 F2RL2O00254 374 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 IL1AP01583 271 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 HTR1DP28221 377 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 GDNFP39905 211 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 MLLT11Q13015 90 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 TBCEQ15813 527 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 ATAD3CQ5T2N8 411 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 BAIAP2L2Q6UXY1 529 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 CEACAM19Q7Z692 300 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 LYPD6Q86Y78 171 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 OR4P4Q8NGL7 312 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 OR13A1Q8NGR1 328 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 NEK7Q8TDX7 302 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 KIRREL1Q96J84 757 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
CHMP1A-208ENST00000550102 CRTAPO75718 401 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 SC5DO75845 299 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 TSPAN9O75954 239 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 UCHL1P09936 223 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 MGMTP16455 207 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 NFYBP25208 207 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 PSMA1P25786 263 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 DYNLT3P51808 116 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 TPBGQ13641 420 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 TRAM1Q15629 374 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 C17orf58Q2M2W7 97 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 HSD17B12Q53GQ0 312 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 SLC35E4Q6ICL7 350 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 MRGPRDQ8TDS7 321 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 Q9H521 79 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 RANBP3Q9H6Z4 567 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 ZNF286AQ9HBT8 521 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 RCC2Q9P258 522 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 GHRLQ9UBU3 117 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 PITPNC1Q9UKF7 332 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 TCF19Q9Y242 345 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 HILPDAQ9Y5L2 63 aa13.92□□□□□ -0.18
CHMP1A-208ENST00000550102 A0A087X0M5 115 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 A0A1B0GX30 115 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A10PA6NDY2 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A18PA6NE21 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A16PA6NEW6 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A20PA6NIJ5 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A7PA6NKC0 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A22PA8MWA6 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A12PA8MX19 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A5PA8MXJ8 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A23PA8MXZ1 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 TOR1AO14656 332 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 CHST1O43916 411 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 IGLV1-47P01700 117 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A15PP0C7V4 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A13PP0C7W8 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A14PP0C7W9 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 FAM90A24PP0C7X0 464 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 UBBP0CG47 229 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 CGB3P0DN86 165 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 CGB7P0DN87 165 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 CPEP16870 476 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 GABRA5P31644 462 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 CEACAM3P40198 252 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 ARHGDIBP52566 201 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 GP2P55259 537 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 GLT8D1Q68CQ7 371 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 BRICD5Q6PL45 260 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 ZNF367Q7RTV3 350 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 LRRTM1Q86UE6 522 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 PIFOQ8TCI5 191 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 TMEM203Q969S6 136 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 CREB3L1Q96BA8 519 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 Q96M66 194 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 SELENOIQ9C0D9 397 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 NPFFR1Q9GZQ6 430 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 CST11Q9H112 138 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 BANF2Q9H503 90 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 LINC00574Q9H8X3 128 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 DPM3Q9P2X0 92 aa13.91□□□□□ -0.18
CHMP1A-208ENST00000550102 SSTR5P35346 364 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 MAP2K4P45985 399 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 PRRX1P54821 245 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 PROK1P58294 105 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 GABARAPL2P60520 117 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 RPS25P62851 125 aaKnown RBP13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 RBM39Q14498 530 aaKnown RBP13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 HLA-DRB5Q30154 266 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 RAB12Q6IQ22 244 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 TMEM104Q8NE00 496 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 OR9G1Q8NH87 305 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 MGLLQ99685 303 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 IDI2-AS1Q9NZ38 188 aa13.9□□□□□ -0.18
CHMP1A-208ENST00000550102 A6NDX4 124 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 LEUTXA8MZ59 168 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 MCRIP1C9JLW8 97 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 H3BUI4 141 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 AIPO00170 330 aa13.89□□□□□ -0.19
CHMP1A-208ENST00000550102 ARL6IP5O75915 188 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms