RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 S100A13Q99584 98 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 DPCDQ9BVM2 203 aaPredicted RBP13.06□□□□□ -0.32
VPS29-207ENST00000549970 MMP28Q9H239 520 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 IDI2-AS1Q9NZ38 188 aa13.06□□□□□ -0.32
VPS29-207ENST00000549970 MAGEA13PA6NCF6 341 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 SH2D7A6NKC9 451 aaPredicted RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 OR2F2O95006 317 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 SSTR5P35346 364 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 MNDAP41218 407 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 KCNJ3P48549 501 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 RBM11P57052 281 aaKnown RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 ADARB1P78563 741 aaKnown RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 EMX1Q04741 257 aaPredicted RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 DMKNQ6E0U4 476 aaPredicted RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 CCDC144NLQ6NUI1 221 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 PACRGLQ8N7B6 248 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 OR52N1Q8NH53 320 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 GGHQ92820 318 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 TOMM40LQ969M1 308 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 RPEQ96AT9 228 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 ZNF184Q99676 751 aaPredicted RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 NCOR1P1Q9H4R4 102 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 IL36GQ9NZH8 169 aa13.05□□□□□ -0.32
VPS29-207ENST00000549970 AMMECR1Q9Y4X0 333 aaPredicted RBP13.05□□□□□ -0.32
VPS29-207ENST00000549970 TRBV5-5A0A0J9YX44 114 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 PNMA8CA0A1B0GUJ8 204 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 ADARB2-AS1A8MUL3 147 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 J3QR06 171 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 GEMIN2O14893 280 aaKnown RBP13.04□□□□□ -0.32
VPS29-207ENST00000549970 LPLP06858 475 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 GNG10P50151 68 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 ST3GAL4Q11206 333 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 BEAN1Q3B7T3 259 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 Q499Y3 187 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 SLC22A6Q4U2R8 563 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 YIF1BQ5BJH7 314 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 OR4F17Q8NGA8 305 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 OR5AU1Q8NGC0 362 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 PGLYRP3Q96LB9 341 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 OR4F4Q96R69 305 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 PAK1IP1Q9NWT1 392 aaPredicted RBP13.04□□□□□ -0.32
VPS29-207ENST00000549970 CKLFQ9UBR5 152 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 PSG11Q9UQ72 335 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 DNAH3Q8TD57 4116 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 NOTCH3Q9UM47 2321 aa13.04□□□□□ -0.32
VPS29-207ENST00000549970 TRAV8-7A0A075B6U6 113 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 A0A1W2PP11 408 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 A0A1W2PPK0 400 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 A0A1W2PRX2 142 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 OOSP1A8MZH6 123 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 GNAO1P09471 354 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 IGFBP3P17936 291 aaPredicted RBP13.03□□□□□ -0.32
VPS29-207ENST00000549970 RPS11P62280 158 aaKnown RBP eCLIP13.03□□□□□ -0.32
VPS29-207ENST00000549970 PAX5Q02548 391 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 NHLRC3Q5JS37 347 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 C9orf152Q5JTZ5 239 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 SAMD5Q5TGI4 173 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 CENPVQ7Z7K6 275 aaPredicted RBP13.03□□□□□ -0.32
VPS29-207ENST00000549970 ZNF485Q8NCK3 441 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 OR56B4Q8NH76 319 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 IFT22Q9H7X7 185 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 LINC00574Q9H8X3 128 aa13.03□□□□□ -0.32
VPS29-207ENST00000549970 A0A1W2PPE3 182 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 TMEM30CPA0ZSE6 113 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 XPNPEP2O43895 674 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 ZNF780AO75290 641 aaPredicted RBP13.02□□□□□ -0.33
VPS29-207ENST00000549970 AMY1AP04745 511 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 AMY2AP04746 511 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 FAM106CPP0CH98 169 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 CAPGP40121 348 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 MADCAM1Q13477 382 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 DIAPH2-AS1Q14236 149 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 LINC00596Q86U02 117 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 C8orf59Q8N0T1 100 aaPredicted RBP13.02□□□□□ -0.33
VPS29-207ENST00000549970 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 OR14A2Q96R54 314 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 PCDHB16Q9NRJ7 776 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 HSPE1-MOB4S4R3N1 261 aa13.02□□□□□ -0.33
VPS29-207ENST00000549970 EFCAB10A6NFE3 127 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 GPX5O75715 221 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 PRB2P02812 416 aaPredicted RBP13.01□□□□□ -0.33
VPS29-207ENST00000549970 SNRNP70P08621 437 aaKnown RBP13.01□□□□□ -0.33
VPS29-207ENST00000549970 GTF2F2P13984 249 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 FSTP19883 344 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 TAS2R43P59537 309 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 CD83Q01151 205 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 MPV17LQ2QL34 196 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 LAIR2Q6ISS4 152 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 AHSA2Q719I0 299 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 DRAM1Q8N682 238 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 OR10A7Q8NGE5 316 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 OR10X1Q8NGY0 326 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 UBALD1Q8TB05 177 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 CCDC107Q8WV48 283 aa13.01□□□□□ -0.33
VPS29-207ENST00000549970 MUL1Q969V5 352 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms