RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 DUS4LO95620 317 aaKnown RBP11.2□□□□□ -0.62
PTCH1-217ENST00000548420 FBP1P09467 338 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 OR3A4PP47883 348 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 GP2P55259 537 aaKnown RBP11.2□□□□□ -0.62
PTCH1-217ENST00000548420 SNU13P55769 128 aaKnown RBP11.2□□□□□ -0.62
PTCH1-217ENST00000548420 P2RX3P56373 397 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 PAX5Q02548 391 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 IL13RA2Q14627 380 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 PRSS48Q7RTY5 328 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 TPRX1Q8N7U7 411 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 OR4C13Q8NGP0 309 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 THRSPQ92748 146 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 ZNF184Q99676 751 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-217ENST00000548420 NKX3-1Q99801 234 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-217ENST00000548420 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 IFT22Q9H7X7 185 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 ISYNA1Q9NPH2 558 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 CKLFQ9UBR5 152 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 FAM96BQ9Y3D0 163 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 TRAV24A0A0B4J272 114 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 A0A1W2PPK0 400 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 A0A1W2PRD5 423 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 A0A1W2PRF3 423 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 A0A1W2PRM7 423 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 MEIOCA2RUB1 952 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 DEGS1O15121 323 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 RGS10O43665 173 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 CDRT1O95170 752 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 CGB3P0DN86 165 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 CGB7P0DN87 165 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 IGHV1-8P0DP01 117 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 CD37P11049 281 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 VHLP40337 213 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 TPBGQ13641 420 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 EDDM3AQ14507 147 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 RSU1Q15404 277 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 ACSM3Q53FZ2 586 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 RBM48Q5RL73 367 aaKnown RBP11.19□□□□□ -0.62
PTCH1-217ENST00000548420 BEND2Q8NDZ0 799 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 OR11H6Q8NGC7 330 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 C17orf50Q8WW18 174 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 ZNF714Q96N38 554 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 METTL9Q9H1A3 318 aa11.19□□□□□ -0.62
PTCH1-217ENST00000548420 UBE2J1Q9Y385 318 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-217ENST00000548420 FUOMA2VDF0 154 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 ODF3BA8MYP8 253 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 ZNF780AO75290 641 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-217ENST00000548420 ZNF44P15621 663 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 MAPK3P27361 379 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-217ENST00000548420 GLIPR1P48060 266 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 AESQ08117 197 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 LY6EQ16553 131 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 AANATQ16613 207 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 OR10K1Q8NGX5 313 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 COQ2Q96H96 371 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 TAS2R3Q9NYW6 316 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 ING4Q9UNL4 249 aa11.18□□□□□ -0.62
PTCH1-217ENST00000548420 ODAMA1E959 279 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 MEX3AA1L020 520 aaKnown RBP11.17□□□□□ -0.62
PTCH1-217ENST00000548420 DENRO43583 198 aaKnown RBP11.17□□□□□ -0.62
PTCH1-217ENST00000548420 HTR3BO95264 441 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 RBM11P57052 281 aaKnown RBP11.17□□□□□ -0.62
PTCH1-217ENST00000548420 SCN1BQ07699 218 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 INSL4Q14641 139 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 MED22Q15528 200 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 PIGYQ3MUY2 71 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 LDLRAD2Q5SZI1 272 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 HEPN1Q6WQI6 88 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 ZNF782Q6ZMW2 699 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-217ENST00000548420 LINC00596Q86U02 117 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 OSR2Q8N2R0 312 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 OR13D1Q8NGV5 346 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 OR5R1Q8NH85 324 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 CNBD2Q96M20 576 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 NR1H4Q96RI1 486 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-217ENST00000548420 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 FAM192AQ9GZU8 254 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 PPIL3Q9H2H8 161 aaKnown RBP11.17□□□□□ -0.62
PTCH1-217ENST00000548420 RANBP3Q9H6Z4 567 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-217ENST00000548420 LINC00574Q9H8X3 128 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 PCDHB16Q9NRJ7 776 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 ST3GAL6Q9Y274 331 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
PTCH1-217ENST00000548420 H3BUX3 64 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 CHST1O43916 411 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 MMP23AO75900 390 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 MAS1P04201 325 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 PF4V1P10720 104 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 CPEP16870 476 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 KCNJ3P48549 501 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 CD83Q01151 205 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 MLLT11Q13015 90 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-217ENST00000548420 GPR176Q14439 515 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 KRBOX4Q5JUW0 171 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 LRRTM1Q86UE6 522 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
PTCH1-217ENST00000548420 NKAIN3Q8N8D7 197 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms