RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 H0YIZ8 118 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 WNT9BO14905 357 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 GNRHRP30968 328 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 HLA-DRB3P79483 266 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 SP6Q3SY56 376 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 ASF1BQ9NVP2 202 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 A6NLC8 198 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 HAND1O96004 215 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 GLRXP35754 106 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 CLLU1Q5K131 121 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 FIP1L1Q6UN15 594 aaKnown RBP17.68■□□□□ 0.42
RITA1-201ENST00000548278 CCDC71LQ8N9Z2 235 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 VRK1Q99986 396 aaPredicted RBP17.68■□□□□ 0.42
RITA1-201ENST00000548278 SUCNR1Q9BXA5 334 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 RAXQ9Y2V3 346 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 SPEF1Q9Y4P9 236 aa17.68■□□□□ 0.42
RITA1-201ENST00000548278 IGKV1D-13A0A0B4J2D9 117 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 H7C1Q1 480 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 B3GALNT1O75752 331 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 IGKV1-13P0DP09 117 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 CCKARP32238 428 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 SLC51BQ86UW2 128 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 LRTM2Q8N967 370 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 MRPL24Q96A35 216 aaKnown RBP17.67■□□□□ 0.42
RITA1-201ENST00000548278 CABLES2Q9BTV7 478 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 UFSP2Q9NUQ7 469 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 PCDHB10Q9UN67 800 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 LINC00862A6NCI5 91 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 IGHV3-13P01766 116 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 LYL1P12980 280 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 HOXA4Q00056 320 aaPredicted RBP17.67■□□□□ 0.42
RITA1-201ENST00000548278 GGNBP1Q5YKI7 109 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 ACP7Q6ZNF0 438 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 MOB1BQ7L9L4 216 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 LDLRAD3Q86YD5 345 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 GLYATL2Q8WU03 294 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 GSX2Q9BZM3 304 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 DUSP13Q9UII6 198 aa17.67■□□□□ 0.42
RITA1-201ENST00000548278 MPPED1O15442 326 aa17.66■□□□□ 0.42
RITA1-201ENST00000548278 CEBPDP49716 269 aaPredicted RBP17.66■□□□□ 0.42
RITA1-201ENST00000548278 UCNP55089 124 aa17.66■□□□□ 0.42
RITA1-201ENST00000548278 MZT1Q08AG7 82 aa17.66■□□□□ 0.42
RITA1-201ENST00000548278 LIAT1Q6ZQX7 453 aa17.66■□□□□ 0.42
RITA1-201ENST00000548278 FAM185AQ8N0U4 392 aa17.66■□□□□ 0.42
RITA1-201ENST00000548278 INO80EQ8NBZ0 244 aaPredicted RBP17.66■□□□□ 0.42
RITA1-201ENST00000548278 TMEM171Q8WVE6 324 aa17.66■□□□□ 0.42
RITA1-201ENST00000548278 MSI2Q96DH6 328 aaKnown RBP17.66■□□□□ 0.42
RITA1-201ENST00000548278 OR14J1Q9UGF5 321 aa17.66■□□□□ 0.42
RITA1-201ENST00000548278 CHD3Q12873 2000 aaKnown RBP17.66■□□□□ 0.42
RITA1-201ENST00000548278 ANKRD34BA5PLL1 514 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 LMO1P25800 156 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 IAH1Q2TAA2 248 aaPredicted RBP17.65■□□□□ 0.42
RITA1-201ENST00000548278 BEX5Q5H9J7 111 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 OR2Z1Q8NG97 314 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 SECTM1Q8WVN6 248 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 DCUN1D4Q92564 292 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 GSKIPQ9P0R6 139 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 SH3BGRL2Q9UJC5 107 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 TRAV39A0A0B4J263 110 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 ATP6V1G2-DDX39BF2Z307 99 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 KCNAB3O43448 404 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 BCL2L11O43521 198 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 PSPNO60542 156 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 IFNA21P01568 189 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 RND3P61587 244 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 RAB32Q13637 225 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 PRSS54Q6PEW0 395 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 ZNF818PQ6ZRF7 136 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 H1FOOQ8IZA3 346 aaPredicted RBP17.65■□□□□ 0.42
RITA1-201ENST00000548278 ZNF565Q8N9K5 539 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 RELL2Q8NC24 303 aaPredicted RBP17.65■□□□□ 0.42
RITA1-201ENST00000548278 PCNPQ8WW12 178 aaKnown RBP17.65■□□□□ 0.42
RITA1-201ENST00000548278 KIRREL1Q96J84 757 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 C18orf12Q96KH6 178 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 ELOVL5Q9NYP7 299 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 MEMO1Q9Y316 297 aa17.65■□□□□ 0.42
RITA1-201ENST00000548278 TLN1Q9Y490 2541 aaKnown RBP17.64■□□□□ 0.41
RITA1-201ENST00000548278 ZSCAN5BA6NJL1 495 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 PTBP3O95758 552 aaKnown RBP17.64■□□□□ 0.41
RITA1-201ENST00000548278 CD200P41217 278 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 C6orf183Q5T699 404 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 OR10J5Q8NHC4 309 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 RRNAD1Q96FB5 475 aaKnown RBP17.64■□□□□ 0.41
RITA1-201ENST00000548278 TP53RKQ96S44 253 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 SLC5A7Q9GZV3 580 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 MBNL3Q9NUK0 354 aaKnown RBP17.64■□□□□ 0.41
RITA1-201ENST00000548278 OR5AC2Q9NZP5 309 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 JKAMPQ9P055 326 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 TAAR3PQ9P1P4 343 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 GLS2Q9UI32 602 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 WIPI2Q9Y4P8 454 aa17.64■□□□□ 0.41
RITA1-201ENST00000548278 KANTRA0A1W2PQU2 76 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 NPIPB11E5RHQ5 1161 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 GPR31O00270 319 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 PHF1O43189 567 aaPredicted RBP17.63■□□□□ 0.41
RITA1-201ENST00000548278 KLF3P57682 345 aaPredicted RBP17.63■□□□□ 0.41
RITA1-201ENST00000548278 RAB14P61106 215 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 ALKAL2Q6UX46 152 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 FAM219AQ8IW50 185 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 PRR7Q8TB68 274 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms