RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 PIEZO2Q9H5I5 2752 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 RP1L1Q8IWN7 2480 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-215ENST00000547672 LOC400499M0QZD8 3231 aa11.33□□□□□ -0.59
PTCH1-215ENST00000547672 ESPL1Q14674 2120 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 DMXL2Q8TDJ6 3036 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 OOEPA6NGQ2 149 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 RFPL4AA6NLU0 287 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 FAM90A27PA6NNH2 459 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 C17orf100A8MU93 164 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 RFPL4AL1F8VTS6 287 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 HSPB6O14558 160 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 LHBP01229 141 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 PPYP01298 95 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 IGHV1-46P01743 117 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 EFNB3Q15768 340 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 ZNF826PQ6ZT77 177 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 MOGAT3Q86VF5 341 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 ADAD2Q8NCV1 583 aaKnown RBP11.33□□□□□ -0.6
PTCH1-215ENST00000547672 OR5M8Q8NGP6 311 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 CASTOR1Q8WTX7 329 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 ITLN1Q8WWA0 313 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 DYRK2Q92630 601 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 CNTNAP3BQ96NU0 1288 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 RSRP1Q9BUV0 290 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 CNTNAP3Q9BZ76 1288 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 CHIAQ9BZP6 476 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 MBNL3Q9NUK0 354 aaKnown RBP11.33□□□□□ -0.6
PTCH1-215ENST00000547672 ITGB1BP2Q9UKP3 347 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 PPP1R3CQ9UQK1 317 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 RNF115Q9Y4L5 304 aa11.33□□□□□ -0.6
PTCH1-215ENST00000547672 TRBV6-7A0A0A0MS04 114 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 CRYM-AS1A6NIL9 109 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 HMSDA8MTL9 139 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 MGST3O14880 152 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 BET1O15155 118 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 HSPA12AO43301 675 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 RND3P61587 244 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 ADORA2A-AS1P86434 159 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 CLEC18BQ6UXF7 455 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 C22orf34Q6ZV56 151 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 ZNF561Q8N587 486 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 GALMQ96C23 342 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 GALNT14Q96FL9 552 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 CABLES2Q9BTV7 478 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 SLA2Q9H6Q3 261 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 DYNLRB1Q9NP97 96 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 ZFP57Q9NU63 452 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 OR2W1Q9Y3N9 320 aa11.32□□□□□ -0.6
PTCH1-215ENST00000547672 NCOR2Q9Y618 2525 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 GPR31O00270 319 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 SPINT2O43291 252 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 TUSC2O75896 110 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 SCTP09683 121 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 PSG2P11465 335 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 AADACP22760 399 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 PIGPP57054 158 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 FXYD4P59646 89 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 COL10A1Q03692 680 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 TLE1Q04724 770 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 MSMPQ1L6U9 139 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 IGSF11Q5DX21 431 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-215ENST00000547672 NINJ1Q92982 152 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 AKR1E2Q96JD6 320 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 NMES1Q9C002 83 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 SLC5A7Q9GZV3 580 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 FAM234AQ9H0X4 552 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 DNTTIP1Q9H147 329 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 NAA60Q9H7X0 242 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 METTL8Q9H825 291 aaKnown RBP11.31□□□□□ -0.6
PTCH1-215ENST00000547672 GCM1Q9NP62 436 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 IGF2RP11717 2491 aa11.31□□□□□ -0.6
PTCH1-215ENST00000547672 TLN1Q9Y490 2541 aaKnown RBP11.31□□□□□ -0.6
PTCH1-215ENST00000547672 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 TRAV38-1A0A0B4J264 116 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-215ENST00000547672 C5orf51A6NDU8 294 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 SHISA9B4DS77 424 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 WNT9BO14905 357 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 CD8AP01732 235 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 PET100P0DJ07 73 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 NFYAP23511 347 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-215ENST00000547672 IL2RGP31785 369 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 GABRA2P47869 451 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-215ENST00000547672 NKX2-5P52952 324 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-215ENST00000547672 HMGN3Q15651 99 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 MSMO1Q15800 293 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 ESCO2Q56NI9 601 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 KRBOX4Q5JUW0 171 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 ADAM5Q6NVV9 412 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 C17orf107Q6ZR85 190 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 LGI3Q8N145 548 aa11.3□□□□□ -0.6
PTCH1-215ENST00000547672 GCSAMQ8N6F7 178 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms