RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 IL13RA2Q14627 380 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 SUMF2Q8NBJ7 301 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 OR13C5Q8NGS8 318 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 HAVCR2Q8TDQ0 301 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 CAPSLQ8WWF8 208 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 MYDGFQ969H8 173 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 TMEM106AQ96A25 262 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 PHF21AQ96BD5 680 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 DPCDQ9BVM2 203 aaPredicted RBP10.61□□□□□ -0.71
CPSF6-204ENST00000547486 BABAM2Q9NXR7 383 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
CPSF6-204ENST00000547486 ST3GAL6Q9Y274 331 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 NOTCH3Q9UM47 2321 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 A0A1W2PPE3 182 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 A0A1W2PPI3 338 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 IL1AP01583 271 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 SNRNP70P08621 437 aaKnown RBP10.6□□□□□ -0.71
CPSF6-204ENST00000547486 FAM106CPP0CH98 169 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 IGLL1P15814 213 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 DCKP27707 260 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 SSTR5P35346 364 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 MNDAP41218 407 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 ARHGDIBP52566 201 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 C9orf152Q5JTZ5 239 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 FOXB2Q5VYV0 432 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 FAM53AQ6NSI3 398 aaPredicted RBP10.6□□□□□ -0.71
CPSF6-204ENST00000547486 CCDC144NLQ6NUI1 221 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 THNSL2Q86YJ6 484 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 DRAM1Q8N682 238 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 ZNF555Q8NEP9 628 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 SGCDQ92629 289 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 GHSRQ92847 366 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 TOMM40LQ969M1 308 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 RPEQ96AT9 228 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 TMEM138Q9NPI0 162 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 NECAP2Q9NVZ3 263 aa10.6□□□□□ -0.71
CPSF6-204ENST00000547486 AURKAIP1Q9NWT8 199 aaPredicted RBP10.6□□□□□ -0.71
CPSF6-204ENST00000547486 A0A1W2PP11 408 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 MAGEA13PA6NCF6 341 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 GEMIN2O14893 280 aaKnown RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 CD2P06729 351 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 IGFBP3P17936 291 aaPredicted RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 ZNF93P35789 620 aaPredicted RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 GNG10P50151 68 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 RBM11P57052 281 aaKnown RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 RPS11P62280 158 aaKnown RBP eCLIP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 HNF4GQ14541 408 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 LRRC36Q1X8D7 754 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 NHLRC3Q5JS37 347 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 DDI2Q5TDH0 399 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 DMKNQ6E0U4 476 aaPredicted RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 TMPRSS11AQ6ZMR5 421 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 REC114Q7Z4M0 266 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 OSR2Q8N2R0 312 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 ZNF485Q8NCK3 441 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 OR52N1Q8NH53 320 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 OR56B4Q8NH76 319 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 SMIM19Q96E16 107 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 RDH12Q96NR8 316 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 METTL9Q9H1A3 318 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 IFT22Q9H7X7 185 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 IL36GQ9NZH8 169 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 DIMT1Q9UNQ2 313 aaKnown RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 ZNF281Q9Y2X9 895 aa10.59□□□□□ -0.71
CPSF6-204ENST00000547486 TSSC4Q9Y5U2 329 aaPredicted RBP10.59□□□□□ -0.71
CPSF6-204ENST00000547486 TRBV5-5A0A0J9YX44 114 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 C15orf65H3BRN8 121 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 EBAG9O00559 213 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 OR7C1O76099 320 aaPredicted RBP10.58□□□□□ -0.72
CPSF6-204ENST00000547486 CD33P20138 364 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 SERPINA2P20848 420 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 BDKRB2P30411 391 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 KCNJ3P48549 501 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 MADCAM1Q13477 382 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 SLC16A12Q6ZSM3 486 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 ZNF329Q86UD4 541 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 ZFP41Q8N8Y5 198 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 OR10A7Q8NGE5 316 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 UBALD1Q8TB05 177 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 CCDC107Q8WV48 283 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.58□□□□□ -0.72
CPSF6-204ENST00000547486 MOB4Q9Y3A3 225 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 AMMECR1Q9Y4X0 333 aaPredicted RBP10.58□□□□□ -0.72
CPSF6-204ENST00000547486 HSPE1-MOB4S4R3N1 261 aa10.58□□□□□ -0.72
CPSF6-204ENST00000547486 TRAV8-7A0A075B6U6 113 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 A0A1W2PPK0 400 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 M0QZK8 103 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 PIN1P1O15428 100 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 GPX5O75715 221 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 MT-ND4P03905 459 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 CSTBP04080 98 aaKnown RBP10.57□□□□□ -0.72
CPSF6-204ENST00000547486 PF4V1P10720 104 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 GZMHP20718 246 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 LOXL3P58215 753 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 PPP3R1P63098 170 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 DOC2BQ14184 412 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 HES1Q14469 280 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 LAIR2Q6ISS4 152 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 C5orf56Q8N8D9 126 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms