RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 WDR86Q86TI4 376 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 TBC1D26Q86UD7 250 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 OR2Z1Q8NG97 314 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 OR5A2Q8NGI9 324 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 GLYATL2Q8WU03 294 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 SPSB4Q96A44 273 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 DCTN5Q9BTE1 182 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 SPEF1Q9Y4P9 236 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 CHD3Q12873 2000 aaKnown RBP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 EIF3GO75821 320 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 C1QL1O75973 258 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 CTSDP07339 412 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 LINC00205P59089 165 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 DHODHQ02127 395 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 NHLH2Q02577 135 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 DAZAP2Q15038 168 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 PXDC1Q5TGL8 231 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 FAHD2BQ6P2I3 314 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 DPPA2Q7Z7J5 298 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 LRP11Q86VZ4 500 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 FAHD2AQ96GK7 314 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 IGHV3OR15-7A0A075B7D8 119 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 TRAV24A0A0B4J272 114 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 PRH1P02810 166 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 CEBPGP53567 150 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 UBA52P62987 128 aaKnown RBP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 ZNF616Q08AN1 781 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 HERPUD1Q15011 391 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 GABRA6Q16445 453 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 BAP18Q8IXM2 172 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 LILRB1Q8NHL6 650 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 ERGIC1Q969X5 290 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 NUDT16L1Q9BRJ7 211 aaKnown RBP10.83□□□□□ -0.68
SCAF11-209ENST00000547018 RTL8AQ9BWD3 113 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 HSF4Q9ULV5 492 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 EDARQ9UNE0 448 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
SCAF11-209ENST00000547018 CRYM-AS1A6NIL9 109 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 CECR9P0C854 216 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 GCH1P30793 250 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 ZCCHC24Q8N2G6 241 aaKnown RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 OR10V1Q8NGI7 309 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 OR10J5Q8NHC4 309 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 MYOZ1Q9NP98 299 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 PROCRQ9UNN8 238 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 DBX1A6NMT0 343 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 SPRY3O43610 288 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 SSSCA1O60232 199 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 OR2H2O95918 312 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 MBPP02686 304 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 TPT1P13693 172 aaKnown RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 TMEM33P57088 247 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 ZNF169Q14929 603 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 PLEKHN1Q494U1 663 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 CXorf66Q5JRM2 361 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 RTL6Q6ICC9 239 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 FBXL17Q9UF56 701 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 IGKV1-6A0A0C4DH72 117 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 C3orf85A0A1B0GTC6 90 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 FAM24AA6NFZ4 105 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 ZNF891A8MT65 544 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 WRBO00258 174 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 ADAM20O43506 726 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 RBMXL2O75526 392 aaKnown RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 MED6O75586 246 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 FHITP49789 147 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 FAM27E3Q08E93 113 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 TMEM65Q6PI78 240 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 MRPS24Q96EL2 167 aaKnown RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 PIK3IP1Q96FE7 263 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 RASL12Q9NYN1 266 aa10.82□□□□□ -0.68
SCAF11-209ENST00000547018 RCL1Q9Y2P8 373 aaKnown RBP10.82□□□□□ -0.68
SCAF11-209ENST00000547018 MPPED1O15442 326 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 DTYMKP23919 212 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 SRSF3P84103 164 aaKnown RBP10.81□□□□□ -0.68
SCAF11-209ENST00000547018 PRSS54Q6PEW0 395 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 Q6ZT83 130 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 POC1AQ8NBT0 407 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 CCDC54Q8NEL0 328 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 PLPPR1Q8TBJ4 325 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 NMES1Q9C002 83 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 TMEM100Q9NV29 134 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 ZNF14P17017 642 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-209ENST00000547018 ATF4P18848 351 aaPredicted RBP10.81□□□□□ -0.68
SCAF11-209ENST00000547018 TAGLNQ01995 201 aaKnown RBP10.81□□□□□ -0.68
SCAF11-209ENST00000547018 KRTAP27-1Q3LI81 207 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 ASCL5Q7RTU5 278 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 MRGPRDQ8TDS7 321 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 CNTNAP3BQ96NU0 1288 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 CNTNAP3Q9BZ76 1288 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 TAF9BQ9HBM6 251 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 Q9N2K0 584 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 TNCP24821 2201 aa10.81□□□□□ -0.68
SCAF11-209ENST00000547018 ACSF3Q4G176 576 aaPredicted RBP10.8□□□□□ -0.68
SCAF11-209ENST00000547018 BTNL3Q6UXE8 466 aa10.8□□□□□ -0.68
SCAF11-209ENST00000547018 PRRX2Q99811 253 aa10.8□□□□□ -0.68
SCAF11-209ENST00000547018 CLCF1Q9UBD9 225 aa10.8□□□□□ -0.68
SCAF11-209ENST00000547018 METRNQ9UJH8 293 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms