RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 NUP50Q9UKX7 468 aa11.32□□□□□ -0.6
PTCH1-213ENST00000546820 HSF4Q9ULV5 492 aa11.32□□□□□ -0.6
PTCH1-213ENST00000546820 ZNF729A6NN14 1252 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-213ENST00000546820 C17orf98A8MV24 154 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 SOCS1O15524 211 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 MT-ND4P03905 459 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 FPR2P25090 351 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 CHATP28329 748 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 SOX6P35712 828 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 GUCA2AQ02747 115 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 ZNF273Q14593 569 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 IL17RELQ6ZVW7 336 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 C6orf201Q7Z4U5 140 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 Q8N7P7 452 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 PLPPR1Q8TBJ4 325 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 ACOT12Q8WYK0 555 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 TBX15Q96SF7 602 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 FAAP24Q9BTP7 215 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 TRAPPC2LQ9UL33 140 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 SPATA2Q9UM82 520 aa11.31□□□□□ -0.6
PTCH1-213ENST00000546820 CCDC160A6NGH7 325 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 PAHP00439 452 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 FAM157CP0CG43 387 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 CCL3L1P16619 93 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 EFNB2P52799 333 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 MRPS15P82914 257 aaKnown RBP11.3□□□□□ -0.6
PTCH1-213ENST00000546820 DYNC1I2Q13409 638 aaKnown RBP11.3□□□□□ -0.6
PTCH1-213ENST00000546820 OR52W1Q6IF63 320 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 MZT2AQ6P582 158 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 OR10R2Q8NGX6 335 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 LGALS14Q8TCE9 139 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 AP3S1Q92572 193 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 LHX4Q969G2 390 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 RAB3CQ96E17 227 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 MS4A7Q9GZW8 240 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-213ENST00000546820 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 KCNIP1Q9NZI2 227 aa11.3□□□□□ -0.6
PTCH1-213ENST00000546820 A0A0A6YYD4 124 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 CENPVL3A0A0U1RRI6 287 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 KBTBD11-OT1A0A1B0GTJ5 212 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 MEX3AA1L020 520 aaKnown RBP11.29□□□□□ -0.6
PTCH1-213ENST00000546820 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 ZNF182P17025 639 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-213ENST00000546820 GLP1RP43220 463 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 UBE2E1P51965 193 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 DLX6P56179 175 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 TMEM50BP56557 158 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 PLA2G7Q13093 441 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 C6orf183Q5T699 404 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 HEPN1Q6WQI6 88 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 OR13D1Q8NGV5 346 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 NDNFQ8TB73 568 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 MRGPRDQ8TDS7 321 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 CCDC107Q8WV48 283 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 S100A16Q96FQ6 103 aaKnown RBP11.29□□□□□ -0.6
PTCH1-213ENST00000546820 ARHGAP5-AS1Q96IT6 56 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 SULT4A1Q9BR01 284 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 PECRQ9BY49 303 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 CHMP1AQ9HD42 196 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-213ENST00000546820 DIABLOQ9NR28 239 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 RHBDL2Q9NX52 303 aa11.29□□□□□ -0.6
PTCH1-213ENST00000546820 A0A0A6YYH2 397 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 TRAV40A0A0B4J280 105 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 IGHV1-69DA0A0B4J2H0 117 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 A6NJ64 397 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 FOXI3A8MTJ6 420 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-213ENST00000546820 RAB27BO00194 218 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 ORC5O43913 435 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 CLPXO76031 633 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 FSHBP01225 129 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 IFNA2P01563 188 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 IGHV1-69P01742 117 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 CGB3P0DN86 165 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 CGB7P0DN87 165 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 IGHV1-8P0DP01 117 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 KLF17Q5JT82 389 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-213ENST00000546820 GAPTQ8N292 157 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 OR13A1Q8NGR1 328 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 OR5H6Q8NGV6 325 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 OR4K15Q8NH41 348 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 ISOC1Q96CN7 298 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 CMTM3Q96MX0 182 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
PTCH1-213ENST00000546820 CALYQ9NYX4 217 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 NDUFA13Q9P0J0 144 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 MGAT4AQ9UM21 535 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 SESN1Q9Y6P5 492 aa11.28□□□□□ -0.6
PTCH1-213ENST00000546820 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
PTCH1-213ENST00000546820 SERPINE3A8MV23 424 aa11.27□□□□□ -0.61
PTCH1-213ENST00000546820 SPINT2O43291 252 aa11.27□□□□□ -0.61
PTCH1-213ENST00000546820 CD3GP09693 182 aa11.27□□□□□ -0.61
PTCH1-213ENST00000546820 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.61
PTCH1-213ENST00000546820 EPHA1P21709 976 aa11.27□□□□□ -0.61
PTCH1-213ENST00000546820 CDK2P24941 298 aa11.27□□□□□ -0.61
PTCH1-213ENST00000546820 TALDO1P37837 337 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms