RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	RSBN1	Q5VWQ0	802 aa	Predicted RBP	18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	ETV3L	Q6ZN32	361 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	CBR4	Q8N4T8	237 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	C5orf56	Q8N8D9	126 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	OR51D1	Q8NGF3	324 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	RFESD	Q8TAC1	157 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	PLPPR1	Q8TBJ4	325 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	CPNE2	Q96FN4	548 aa	Predicted RBP	18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	ERVK13-1	Q9NX77	482 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	TRAV39	A0A0B4J263	110 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720		H3BNX3	289 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	MAGEB3	O15480	346 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	FADS2	O95864	444 aa	Known RBP	18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	RPL23A	P62750	156 aa	Known RBP	18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	IL13RA2	Q14627	380 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	RSU1	Q15404	277 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	C11orf87	Q6NUJ2	197 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	MRPL41	Q8IXM3	137 aa	Known RBP	18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	NCOR1P1	Q9H4R4	102 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	LINC00574	Q9H8X3	128 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	NBEAL2	Q6ZNJ1	2754 aa		18.82	■□□□□ 0.6
RAP1B-233	ENST00000545720	NPIPB11	E5RHQ5	1161 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	SOX2	P48431	317 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	RAB7A	P51149	207 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	GBX2	P52951	348 aa	Predicted RBP	18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	EGFEM1P	Q0D2K5	195 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	MRPL28	Q13084	256 aa	Known RBP	18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	C18orf65	Q6ZTR6	163 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	OR8H3	Q8N146	312 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	HAVCR2	Q8TDQ0	301 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	CHPT1	Q8WUD6	406 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	DPF1	Q92782	380 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	TAS2R4	Q9NYW5	299 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	ZNF581	Q9P0T4	197 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720	LINC00527	Q9UJ94	153 aa		18.81	■□□□□ 0.6
RAP1B-233	ENST00000545720		A0A1W2PPE3	182 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	SERPINE3	A8MV23	424 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	HTR3B	O95264	441 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	IGKV1D-33	P01593	117 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	IGKV1-33	P01594	117 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	ZNF529	Q6P280	563 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	C8orf86	Q6ZUL3	223 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	OR2W3	Q7Z3T1	314 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	OR10X1	Q8NGY0	326 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	RGP1	Q92546	391 aa	Predicted RBP	18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720		Q96MT0	163 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	GPR61	Q9BZJ8	451 aa		18.8	■□□□□ 0.6
RAP1B-233	ENST00000545720	NUDT19	A8MXV4	375 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	FGF16	O43320	207 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	KCNJ3	P48549	501 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	THBS3	P49746	956 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	GTF2A1	P52655	376 aa	Predicted RBP	18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	PAX5	Q02548	391 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	RAB40B	Q12829	278 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	OR52I1	Q8NGK6	324 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	DPCD	Q9BVM2	203 aa	Predicted RBP	18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	JAM3	Q9BX67	310 aa		18.79	■□□□□ 0.6
RAP1B-233	ENST00000545720	MPZL2	O60487	215 aa		18.78	■□□□□ 0.6
RAP1B-233	ENST00000545720	CDRT1	O95170	752 aa		18.78	■□□□□ 0.6
RAP1B-233	ENST00000545720	ZFP1	Q6P2D0	407 aa		18.78	■□□□□ 0.6
RAP1B-233	ENST00000545720	SLC35E3	Q7Z769	313 aa		18.78	■□□□□ 0.6
RAP1B-233	ENST00000545720	SUMF2	Q8NBJ7	301 aa		18.78	■□□□□ 0.6
RAP1B-233	ENST00000545720	KLHL30-AS1	Q8NEE0	82 aa		18.78	■□□□□ 0.6
RAP1B-233	ENST00000545720	RHOXF1	Q8NHV9	184 aa		18.78	■□□□□ 0.6
RAP1B-233	ENST00000545720	HSD17B6	O14756	317 aa		18.77	■□□□□ 0.6
RAP1B-233	ENST00000545720	REG1B	P48304	166 aa		18.77	■□□□□ 0.6
RAP1B-233	ENST00000545720		Q8NFD4	153 aa		18.77	■□□□□ 0.6
RAP1B-233	ENST00000545720	OR10A7	Q8NGE5	316 aa		18.77	■□□□□ 0.6
RAP1B-233	ENST00000545720	FAM118A	Q9NWS6	357 aa		18.77	■□□□□ 0.6
RAP1B-233	ENST00000545720	ST3GAL6	Q9Y274	331 aa		18.77	■□□□□ 0.6
RAP1B-233	ENST00000545720	IGHV3-72	A0A0B4J1Y9	119 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	OR7C1	O76099	320 aa	Predicted RBP	18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	CD2	P06729	351 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	SLC35B1	P78383	322 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	ASCL4	Q6XD76	172 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	SLC16A12	Q6ZSM3	486 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	MOB3B	Q86TA1	216 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	FOXRED2	Q8IWF2	684 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	GPR148	Q8TDV2	347 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	ZFP57	Q9NU63	452 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	ING4	Q9UNL4	249 aa		18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	RPL36	Q9Y3U8	105 aa	Known RBP	18.76	■□□□□ 0.59
RAP1B-233	ENST00000545720	IGHV1-3	A0A0C4DH29	117 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	CCRL2	O00421	344 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	IGHG2	P01859	326 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	RBM11	P57052	281 aa	Known RBP	18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	CD69	Q07108	199 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	ZNF816	Q0VGE8	651 aa	Predicted RBP	18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	XAF1	Q6GPH4	301 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	STPG2	Q8N412	459 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	UBALD1	Q8TB05	177 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	TMEM106A	Q96A25	262 aa		18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	MCRIP2	Q9BUT9	160 aa	Known RBP	18.75	■□□□□ 0.59
RAP1B-233	ENST00000545720	TMEM30CP	A0ZSE6	113 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	CSTB	P04080	98 aa	Known RBP	18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	LIMS3	P0CW19	117 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	LIMS4	P0CW20	117 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	SERPINA2	P20848	420 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	PPP3R1	P63098	170 aa		18.74	■□□□□ 0.59
RAP1B-233	ENST00000545720	DDI2	Q5TDH0	399 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms