RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 RPS11P62280 158 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCARB1-210ENST00000545493 PPP3R1P63098 170 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 ABCA11PQ4W5N1 156 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 DMKNQ6E0U4 476 aaPredicted RBP16.84■□□□□ 0.29
SCARB1-210ENST00000545493 ZFP41Q8N8Y5 198 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 OR52N1Q8NH53 320 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 R3HDM4Q96D70 268 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 IFT22Q9H7X7 185 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 TMEM138Q9NPI0 162 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 BABAM2Q9NXR7 383 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 ST3GAL6Q9Y274 331 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 A0A1W2PPI3 338 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 J3QR06 171 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 GEMIN2O14893 280 aaKnown RBP16.83■□□□□ 0.28
SCARB1-210ENST00000545493 LPLP06858 475 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 SERPINA2P20848 420 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 PRRX1P54821 245 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 ADARB1P78563 741 aaKnown RBP16.83■□□□□ 0.28
SCARB1-210ENST00000545493 RIPK1Q13546 671 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 DOC2BQ14184 412 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 DIAPH2-AS1Q14236 149 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 LTC4SQ16873 150 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 TCTEX1D4Q5JR98 221 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 CCDC144NLQ6NUI1 221 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 OSR2Q8N2R0 312 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 ZNF565Q8N9K5 539 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 OR4F17Q8NGA8 305 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 TOMM40LQ969M1 308 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 RPEQ96AT9 228 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 TMEM80Q96HE8 168 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 OR4F4Q96R69 305 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 BARHL1Q9BZE3 327 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 METTL9Q9H1A3 318 aa16.83■□□□□ 0.28
SCARB1-210ENST00000545493 AMMECR1Q9Y4X0 333 aaPredicted RBP16.83■□□□□ 0.28
SCARB1-210ENST00000545493 OR7C1O76099 320 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-210ENST00000545493 PRB2P02812 416 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-210ENST00000545493 C21orf33P30042 268 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-210ENST00000545493 MNDAP41218 407 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 GNG10P50151 68 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 CD83Q01151 205 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 EMX1Q04741 257 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-210ENST00000545493 TTC23Q5W5X9 447 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 LAIR2Q6ISS4 152 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 PACRGLQ8N7B6 248 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 SETD9Q8NE22 299 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 OR5AU1Q8NGC0 362 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 OR56B4Q8NH76 319 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 RFESDQ8TAC1 157 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 CAPSLQ8WWF8 208 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 GGHQ92820 318 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 GHSRQ92847 366 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 ZNF184Q99676 751 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-210ENST00000545493 ING4Q9UNL4 249 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 PSG11Q9UQ72 335 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 DNAH9Q9NYC9 4486 aa16.82■□□□□ 0.28
SCARB1-210ENST00000545493 TRAV8-7A0A075B6U6 113 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 A0A1W2PRX2 142 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A18PA6NE21 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A16PA6NEW6 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A20PA6NIJ5 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A9PA6NNJ1 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A12PA8MX19 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A5PA8MXJ8 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 H3BUI4 141 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 SNRNP70P08621 437 aaKnown RBP16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A15PP0C7V4 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A13PP0C7W8 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A14PP0C7W9 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FAM90A24PP0C7X0 464 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 FSTP19883 344 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 Q499Y3 187 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 YIF1BQ5BJH7 314 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 OXLD1Q5BKU9 147 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 C10orf99Q6UWK7 81 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 LINC00596Q86U02 117 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 MOB4Q9Y3A3 225 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 HSPE1-MOB4S4R3N1 261 aa16.81■□□□□ 0.28
SCARB1-210ENST00000545493 XPNPEP2O43895 674 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 GPX5O75715 221 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 RCN1Q15293 331 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 MPV17LQ2QL34 196 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 OR10A7Q8NGE5 316 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 OR14A2Q96R54 314 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 C8orf4Q9NR00 106 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 PCDHB16Q9NRJ7 776 aa16.8■□□□□ 0.28
SCARB1-210ENST00000545493 NOTCH3Q9UM47 2321 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 TRBV5-7A0A0A0MS05 114 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 A0A1W2PPE3 182 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 TMEM30CPA0ZSE6 113 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 C15orf65H3BRN8 121 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 CSTBP04080 98 aaKnown RBP16.79■□□□□ 0.28
SCARB1-210ENST00000545493 GNAO1P09471 354 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 DHRSXQ8N5I4 330 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 DRAM1Q8N682 238 aa16.79■□□□□ 0.28
SCARB1-210ENST00000545493 PNMA8CA0A1B0GUJ8 204 aa16.78■□□□□ 0.28
SCARB1-210ENST00000545493 M0QZK8 103 aa16.78■□□□□ 0.28
SCARB1-210ENST00000545493 ST3GAL4Q11206 333 aa16.78■□□□□ 0.28
SCARB1-210ENST00000545493 MADCAM1Q13477 382 aa16.78■□□□□ 0.28
SCARB1-210ENST00000545493 SLC22A6Q4U2R8 563 aa16.78■□□□□ 0.28
SCARB1-210ENST00000545493 UBALD1Q8TB05 177 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms