RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 FAM214BQ7L5A3 538 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 ABHD5Q8WTS1 349 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 ATP5SQ99766 215 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CYSLTR1Q9Y271 337 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 DOCK8Q8NF50 2099 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 PLXNA4Q9HCM2 1894 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 H7C1C5 153 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 NPPBP16860 134 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CELP19835 753 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 TCTN3Q6NUS6 607 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 KLHDC1Q8N7A1 406 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 SLC16A11Q8NCK7 471 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 EMG1Q92979 244 aaKnown RBP7.73□□□□□ -1.17
VPS13D-212ENST00000543766 OXGR1Q96P68 337 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 FAM173AQ9BQD7 235 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 SLC17A5Q9NRA2 495 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 HS3ST3B1Q9Y662 390 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 SCN1AP35498 2009 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 IGKV6-21A0A0C4DH24 114 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 MUC21A0A0G2JKD1 596 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 TMEM129A0AVI4 362 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 HMSDA8MTL9 139 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 CCDC179H3BU77 68 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 NBR2O15453 112 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 DXOO77932 396 aaKnown RBP7.72□□□□□ -1.17
VPS13D-212ENST00000543766 RPS23P62266 143 aaKnown RBP7.72□□□□□ -1.17
VPS13D-212ENST00000543766 EFNB1P98172 346 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 SPANXN4Q5MJ08 99 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 IL34Q6ZMJ4 242 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 ADAD2Q8NCV1 583 aaKnown RBP7.72□□□□□ -1.17
VPS13D-212ENST00000543766 SMIM19Q96E16 107 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 TEX101Q9BY14 249 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 SNX11Q9Y5W9 270 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 PLXNB2O15031 1838 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 ARRDC5A6NEK1 342 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 ZNF593O00488 134 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-212ENST00000543766 IL2RAP01589 272 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 SP9P0CG40 484 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 SRSF4Q08170 494 aaKnown RBP7.72□□□□□ -1.17
VPS13D-212ENST00000543766 KCNRGQ8N5I3 272 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 PLPPR1Q8TBJ4 325 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 ZNF331Q9NQX6 463 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-212ENST00000543766 KLK11Q9UBX7 282 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 VAX2Q9UIW0 290 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 SCN8AQ9UQD0 1980 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 LRP5LA4QPB2 252 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 CHST1O43916 411 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 ELK1P19419 428 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 PPIFP30405 207 aaKnown RBP7.72□□□□□ -1.17
VPS13D-212ENST00000543766 RRADP55042 308 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 TMEM42Q69YG0 159 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 SAP25Q8TEE9 199 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 LINC01599Q8WXQ3 324 aa7.72□□□□□ -1.17
VPS13D-212ENST00000543766 MEIS3P1A6NDR6 274 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 F2RL2O00254 374 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 MFNGO00587 321 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 GCM2O75603 506 aaPredicted RBP7.71□□□□□ -1.17
VPS13D-212ENST00000543766 CD34P28906 385 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 MTNR1BP49286 362 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 CCL11P51671 97 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 HMGA2P52926 109 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 FABP5Q01469 135 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 ACTL10Q5JWF8 245 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 ZFAND6Q6FIF0 208 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 HSD11B1LQ7Z5J1 315 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 CA13Q8N1Q1 262 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 SUMF2Q8NBJ7 301 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 FAM103A1Q9BTL3 118 aaKnown RBP7.71□□□□□ -1.17
VPS13D-212ENST00000543766 DOHHQ9BU89 302 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 CBLCQ9ULV8 474 aa7.71□□□□□ -1.17
VPS13D-212ENST00000543766 TRDV1A0A1B0GX56 115 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 DAPL1A0PJW8 107 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF682O95780 498 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 TPT1P13693 172 aaKnown RBP7.71□□□□□ -1.18
VPS13D-212ENST00000543766 GNG4P50150 75 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 FAM3BP58499 235 aaPredicted RBP7.71□□□□□ -1.18
VPS13D-212ENST00000543766 TBC1D28Q2M2D7 210 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 ARSIQ5FYB1 569 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 SLC25A30Q5SVS4 291 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 PAQR6Q6TCH4 344 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 Q6ZRG5 221 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 KCTD12Q96CX2 325 aaKnown RBP7.71□□□□□ -1.18
VPS13D-212ENST00000543766 Q9N2J8 555 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 RAMP1O60894 148 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 CYB5AP00167 134 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 HRASP01112 189 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 KRASP01116 189 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 MPGP29372 298 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 RHOGP84095 191 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 C12orf73Q69YU5 71 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 UMODL1-AS1Q8N2C9 162 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 OR10G2Q8NGC3 310 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF519Q8TB69 540 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 PELI1Q96FA3 418 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 OR4K3Q96R72 315 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 GPR35Q9HC97 309 aa7.71□□□□□ -1.18
VPS13D-212ENST00000543766 TNFSF11O14788 317 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 HCRTO43612 131 aa7.7□□□□□ -1.18
VPS13D-212ENST00000543766 HYAL3O43820 417 aaPredicted RBP7.7□□□□□ -1.18
VPS13D-212ENST00000543766 APOA2P02652 100 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms