RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 FUT9Q9Y231 359 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 STRCQ7RTU9 1775 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 TRAV38-1A0A0B4J264 116 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 IGSF23A1L1A6 192 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 PAGE4O60829 102 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 PITX3O75364 302 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 FSTP19883 344 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 NANOS3P60323 173 aaKnown RBP11.5□□□□□ -0.57
TNC-212ENST00000542877 FBLIM1Q8WUP2 373 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 PRNDQ9UKY0 176 aa11.5□□□□□ -0.57
TNC-212ENST00000542877 ACTL6AO96019 429 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 ATP6V0CP27449 155 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 PKIAP61925 76 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 A0A1W2PPC1 479 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 SEMA7AO75326 666 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 CXCL2P19875 107 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 VAX1Q5SQQ9 334 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 C1orf53Q5VUE5 145 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 DHRS11Q6UWP2 260 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 MRGPRFQ96AM1 343 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 ZMAT5Q9UDW3 170 aaKnown RBP11.49□□□□□ -0.57
TNC-212ENST00000542877 MS4A18H0YCH9 400 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 CXorf1O96002 111 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 MPLP40238 635 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 KIR3DL2P43630 455 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 UBE2V2Q15819 145 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 TNXAQ16473 311 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 MS4A18Q3C1V0 323 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 TUSC5Q8IXB3 177 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 ZNF383Q8NA42 475 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 OR1L1Q8NH94 360 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 CDIPTO14735 213 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 P01737 135 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 VSIG10L2P0DP72 767 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 SULT1A2P50226 295 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 ZP4Q12836 540 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 GAB4Q2WGN9 574 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 ZNF880Q6PDB4 577 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 DHRS13Q6UX07 377 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 OR52L2PQ8NGH6 319 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 MRPL30Q8TCC3 161 aaKnown RBP11.49□□□□□ -0.57
TNC-212ENST00000542877 PRSS27Q9BQR3 290 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 CIDEAO60543 219 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 ADAM11O75078 769 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 TCL1AP56279 114 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 RIGQ13278 110 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 PIGYQ3MUY2 71 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 IGSF11Q5DX21 431 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
TNC-212ENST00000542877 MAP1LC3CQ9BXW4 147 aa11.49□□□□□ -0.57
TNC-212ENST00000542877 RCC2Q9P258 522 aaKnown RBP11.49□□□□□ -0.57
TNC-212ENST00000542877 MRPS18BQ9Y676 258 aaKnown RBP11.49□□□□□ -0.57
TNC-212ENST00000542877 ASCC3Q8N3C0 2202 aaKnown RBP11.48□□□□□ -0.57
TNC-212ENST00000542877 HELTA6NFD8 242 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 F5H697 171 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 GAPDHP04406 335 aaKnown RBP11.48□□□□□ -0.57
TNC-212ENST00000542877 MGAT2Q10469 447 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 EIF4EBP2Q13542 120 aaPredicted RBP11.48□□□□□ -0.57
TNC-212ENST00000542877 OR2M3Q8NG83 312 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 NRIP2Q9BQI9 281 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 HOXA6P31267 233 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 PPOXP50336 477 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 SFTPA1Q8IWL2 248 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 EIF4E3Q8N5X7 224 aaKnown RBP11.48□□□□□ -0.57
TNC-212ENST00000542877 C5orf17Q8NAS9 161 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 STXBP6Q8NFX7 210 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 ZNF98A6NK75 572 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 FAM157CP0CG43 387 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 COTL1Q14019 142 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 PERPQ96FX8 193 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 HLA-DQB1P01920 261 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 PRSS1P07477 247 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 COX7A1P24310 79 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 LIMS1P48059 325 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 SLC23A3Q6PIS1 610 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 LYPD8Q6UX82 237 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 RNF122Q9H9V4 155 aa11.48□□□□□ -0.57
TNC-212ENST00000542877 DLEC1Q9Y238 1755 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 TMEM210A6NLX4 147 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 PPIHO43447 177 aaKnown RBP11.47□□□□□ -0.57
TNC-212ENST00000542877 SRSF10O75494 262 aaKnown RBP11.47□□□□□ -0.57
TNC-212ENST00000542877 IGHV3-13P01766 116 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 IGHV3-7P01780 117 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 NMBP08949 121 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 PNLIPP16233 465 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 ZFP36L2P47974 494 aaKnown RBP11.47□□□□□ -0.57
TNC-212ENST00000542877 B2MP61769 119 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 SRSF5Q13243 272 aaKnown RBP11.47□□□□□ -0.57
TNC-212ENST00000542877 GAMTQ14353 236 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 C9orf40Q8IXQ3 194 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 ZPLD1Q8TCW7 415 aa11.47□□□□□ -0.57
TNC-212ENST00000542877 TCFL5Q9UL49 500 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms