RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, human

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CA-210	ENST00000542876	C5orf56	Q8N8D9	126 aa		13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	PXT1	Q8NFP0	134 aa		13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	OR10A7	Q8NGE5	316 aa		13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	OR5AK2	Q8NH90	309 aa		13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	MRGPRD	Q8TDS7	321 aa		13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	NOL4L	Q96MY1	436 aa	Predicted RBP	13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	PSG11	Q9UQ72	335 aa		13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	EXOG	Q9Y2C4	368 aa	Known RBP	13.79	□□□□□ -0.2
PPP1CA-210	ENST00000542876	TRAV24	A0A0B4J272	114 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876		A0A1W2PPI3	338 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	IGKV1D-33	P01593	117 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	IGKV1-33	P01594	117 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	ALPL	P05186	524 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	CCDC159	P0C7I6	412 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	RAB3A	P20336	220 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	MYCNOS	P40205	109 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	IL13RA2	Q14627	380 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	RSU1	Q15404	277 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	ETV3L	Q6ZN32	361 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	C8orf86	Q6ZUL3	223 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	SLC35E3	Q7Z769	313 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	LHFPL3	Q86UP9	236 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	SATL1	Q86VE3	508 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	KLHL30-AS1	Q8NEE0	82 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	RFESD	Q8TAC1	157 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	TNFAIP8L1	Q8WVP5	186 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	LGALS12	Q96DT0	336 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	B9D2	Q9BPU9	175 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	FAM192A	Q9GZU8	254 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	LINC00574	Q9H8X3	128 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	FAM118A	Q9NWS6	357 aa		13.78	□□□□□ -0.2
PPP1CA-210	ENST00000542876	ZFPL1	O95159	310 aa		13.77	□□□□□ -0.21
PPP1CA-210	ENST00000542876	FADS2	O95864	444 aa	Known RBP	13.77	□□□□□ -0.21
PPP1CA-210	ENST00000542876	ZIK1	Q3SY52	487 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP1CA-210	ENST00000542876	LINC00527	Q9UJ94	153 aa		13.77	□□□□□ -0.21
PPP1CA-210	ENST00000542876	NCBP2L	A6PVI3	153 aa	Known RBP	13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	NPIPB11	E5RHQ5	1161 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	EI24	O14681	340 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	IGHG2	P01859	326 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	SSTR5	P35346	364 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GBX2	P52951	348 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	PAX5	Q02548	391 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	DIAPH2-AS1	Q14236	149 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	MOB3B	Q86TA1	216 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	ZNF695	Q8IW36	515 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876		Q96MT0	163 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	WWC2-AS2	Q96NR7	200 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	PDCD1LG2	Q9BQ51	273 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GON7	Q9BXV9	100 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	ISG20L2	Q9H9L3	353 aa	Known RBP	13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GMPPB	Q9Y5P6	360 aa		13.76	□□□□□ -0.21
PPP1CA-210	ENST00000542876	CCRL2	O00421	344 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GABRP	O00591	440 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	HSD17B6	O14756	317 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	MPZL2	O60487	215 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	HTR3B	O95264	441 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GAPDH	P04406	335 aa	Known RBP	13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	CD2	P06729	351 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GZMH	P20718	246 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	ALDH3A2	P51648	485 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GP2	P55259	537 aa	Known RBP	13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	RAB25	P57735	213 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	DGCR2	P98153	550 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	PIGY	Q3MUY2	71 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	TEX38	Q6PEX7	206 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	C18orf65	Q6ZTR6	163 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	STPG2	Q8N412	459 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	OR10K1	Q8NGX5	313 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	PLPPR1	Q8TBJ4	325 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	PYDC1	Q8WXC3	89 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	P2RX4	Q99571	388 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	S100A13	Q99584	98 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	DPCD	Q9BVM2	203 aa	Predicted RBP	13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	AASS	Q9UDR5	926 aa		13.75	□□□□□ -0.21
PPP1CA-210	ENST00000542876	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	AP4M1	O00189	453 aa		13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	OR7C1	O76099	320 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	CSTB	P04080	98 aa	Known RBP	13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	GABPB1	Q06547	395 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	SUMF2	Q8NBJ7	301 aa		13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	ERVK13-1	Q9NX77	482 aa		13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	ST3GAL6	Q9Y274	331 aa		13.74	□□□□□ -0.21
PPP1CA-210	ENST00000542876	TENM3	Q9P273	2699 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	TRAV39	A0A0B4J263	110 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	IGHV1-3	A0A0C4DH29	117 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876		A0A1W2PPE3	182 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	TMEM30CP	A0ZSE6	113 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876		E9PI62	339 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	RAMP3	O60896	148 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	VSIG8	P0DPA2	414 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	IL3RA	P26951	378 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	REG1B	P48304	166 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	SOX2	P48431	317 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	RAB40B	Q12829	278 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	PNLIPRP3	Q17RR3	467 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	TGIF2LX	Q8IUE1	241 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876		Q8NFD4	153 aa		13.73	□□□□□ -0.21
PPP1CA-210	ENST00000542876	OR51A2	Q8NGJ7	313 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms