RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 ZNF20P17024 532 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 HTR1FP30939 366 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 NANOS3P60323 173 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 IZUMO1Q8IYV9 350 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 OR51A4Q8NGJ6 313 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 OR13C9Q8NGT0 318 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 RFESDQ8TAC1 157 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 THTPAQ9BU02 230 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 NCOR1P1Q9H4R4 102 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 PLSCR3Q9NRY6 295 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 KRT84Q9NSB2 600 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 FRRS1LQ9P0K9 344 aa13.9□□□□□ -0.18
CLSTN3-214ENST00000542663 TRAV24A0A0B4J272 114 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 IGHG4P01861 327 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 LYL1P12980 280 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 C21orf33P30042 268 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 SSTR5P35346 364 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 REG1BP48304 166 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 GYS2P54840 703 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 ZP1P60852 638 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 GNGT1P63211 74 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 ASPHD1Q5U4P2 390 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 RSBN1Q5VWQ0 802 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 MOB3BQ86TA1 216 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 SPATA24Q86W54 205 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 OR11H1Q8NG94 326 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 OR10X1Q8NGY0 326 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 PLPPR1Q8TBJ4 325 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 MRGPRDQ8TDS7 321 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 RBMXL1Q96E39 390 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 HSPB9Q9BQS6 159 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 NEK6Q9HC98 313 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 MYRFQ9Y2G1 1151 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 SIRT4Q9Y6E7 314 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 HYDINQ4G0P3 5121 aa13.89□□□□□ -0.19
CLSTN3-214ENST00000542663 LY86O95711 162 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 FAM107AO95990 144 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 PSMB8P28062 276 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 PAX5Q02548 391 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 PAN3Q58A45 887 aaKnown RBP13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 SLC16A12Q6ZSM3 486 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 FAM220AQ7Z4H9 259 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 TMEM104Q8NE00 496 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 MYOZ3Q8TDC0 251 aa13.88□□□□□ -0.19
CLSTN3-214ENST00000542663 TRAV39A0A0B4J263 110 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 MPZL2O60487 215 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 GAPDHP04406 335 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 OCM2P0CE71 109 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 OCMP0CE72 109 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 FLOT2Q14254 428 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 KDM4DQ6B0I6 523 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 FDX2Q6P4F2 183 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 OVCH2Q7RTZ1 564 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 OR10A7Q8NGE5 316 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 OR2T10Q8NGZ9 312 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 CNIH3Q8TBE1 160 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 S1PR3Q99500 378 aa13.87□□□□□ -0.19
CLSTN3-214ENST00000542663 TMEM225BP0DP42 221 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 MTNR1BP49286 362 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 INSL3P51460 131 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 KIAA0141Q14154 515 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 KISS1Q15726 138 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 ELP2Q6IA86 826 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 FAM71E2Q8N5Q1 922 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 OR13C3Q8NGS6 347 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 NR1H4Q96RI1 486 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 BARHL1Q9BZE3 327 aa13.86□□□□□ -0.19
CLSTN3-214ENST00000542663 ZNF736B4DX44 427 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 I3L521 148 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 FRMD6-AS1P0C7T7 363 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 DBTP11182 482 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 ATP6V1E1P36543 226 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 FAM53AQ6NSI3 398 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 ST6GALNAC6Q969X2 333 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 EME1Q96AY2 570 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 ZCCHC4Q9H5U6 513 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 GNB4Q9HAV0 340 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 PALMDQ9NP74 551 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 ZNF581Q9P0T4 197 aa13.85□□□□□ -0.19
CLSTN3-214ENST00000542663 OR4C45A6NMZ5 311 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 IGF1P05019 195 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 HCKP08631 526 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 VDAC1P21796 283 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 POLR2IP36954 125 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 CCR9P51686 369 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 F2RL1P55085 397 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 DOC2BQ14184 412 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 ZSCAN26Q16670 478 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 ZFAND6Q6FIF0 208 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 LINC00311Q8N616 119 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 RTN4IP1Q8WWV3 396 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 KCTD7Q96MP8 289 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 CITED4Q96RK1 184 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 RASL11BQ9BPW5 248 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 KLK15Q9H2R5 256 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 ZNF580Q9UK33 172 aa13.84□□□□□ -0.19
CLSTN3-214ENST00000542663 G3V2T6 193 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms