RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 PLPPR5Q32ZL2 321 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF705AQ6ZN79 300 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 LINC00346Q8IVM7 164 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 KDM8Q8N371 416 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 TMEM156Q8N614 296 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 FADS6Q8N9I5 356 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 OR4D5Q8NGN0 318 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 OR1K1Q8NGR3 316 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 MFSD8Q8NHS3 518 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 M1APQ8TC57 530 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 DEFB126Q9BYW3 111 aa6.95□□□□□ -1.3
PDLIM5-221ENST00000542407 LOC102724200A0A096LPH7 203 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 LOC100289279A0A1B0GTE1 492 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 SNAI2O43623 268 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BKO60814 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 SCGB2A1O75556 95 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 IFNA5P01569 189 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 AMBPP02760 352 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 PRH1P02810 166 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 TRGC2P03986 189 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BJP06899 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 CST2P09228 141 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 TACSTD2P09758 323 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BOP23527 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HTR2CP28335 458 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BBP33778 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 APOBEC1P41238 236 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BDP58876 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BCP62807 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 EXT1Q16394 746 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST2H2BEQ16778 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 ABHD17BQ5VST6 288 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 RTL6Q6ICC9 239 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 OR2M3Q8NG83 312 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF417Q8TAU3 575 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BHQ93079 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BNQ99877 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 HIST1H2BMQ99879 126 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 MEGF9Q9H1U4 602 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 KLRF1Q9NZS2 232 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 CGGBP1Q9UFW8 167 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 KLK13Q9UKR3 277 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 RNF150Q9ULK6 438 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 KLHDC2Q9Y2U9 406 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 KIF26BQ2KJY2 2108 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 SHISA8B8ZZ34 492 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 MS4A18H0YCH9 400 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 SULT1A2P50226 295 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 RAB32Q13637 225 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 RHEBQ15382 184 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 BATFQ16520 125 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 ACKR1Q16570 336 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 MS4A18Q3C1V0 323 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 DCAF12Q5T6F0 453 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 AWAT2Q6E213 333 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 PPP1R32Q7Z5V6 425 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 CDC20BQ86Y33 519 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 OR9K2Q8NGE7 335 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 OR14L1PQ8NHC6 308 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 MARCH1Q8TCQ1 289 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF587Q96SQ5 575 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 PROK2Q9HC23 129 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 PARP11Q9NR21 331 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 PLA2G2EQ9NZK7 142 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 VDAC3Q9Y277 283 aa6.94□□□□□ -1.3
PDLIM5-221ENST00000542407 RAMP1O60894 148 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 OR6A2O95222 327 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 ABHD16AO95870 558 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 CD1AP06126 327 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 CXCL1P09341 107 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 HRH1P35367 487 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 RPL27P61353 136 aaKnown RBP6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 CYCSP99999 105 aaKnown RBP6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 Q0VFX4 171 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 ZP4Q12836 540 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 UBE2V2Q15819 145 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 GLYATL3Q5SZD4 288 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 GGNBP1Q5YKI7 109 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 SLC16A9Q7RTY1 509 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF100Q8IYN0 542 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 OR2Z1Q8NG97 314 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 LIN37Q96GY3 246 aaPredicted RBP6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 PKIBQ9C010 78 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 TXNIPQ9H3M7 391 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 MRM2Q9UI43 246 aaKnown RBP6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 PPIAL4EA0A075B759 164 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 TGIF2-C20orf24A0A0A6YYL0 155 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 PPIAL4CA0A0B4J2A2 164 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 IGHV2-70DA0A0C4DH43 119 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 C11orf98E9PRG8 122 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 PPIAL4DF5H284 164 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 C1QL1O75973 258 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 PPIAL4FP0DN26 164 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 HLA-DOBP13765 273 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 FOLR3P41439 243 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 CKS1BP61024 79 aa6.93□□□□□ -1.3
PDLIM5-221ENST00000542407 RPS18P62269 152 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms