RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 UNQ5815/PRO19632Q6UWF5 114 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 HEPN1Q6WQI6 88 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 FOXL2NBQ6ZUU3 175 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 GPRIN3Q6ZVF9 776 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 H2AFVQ71UI9 128 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 HDDC2Q7Z4H3 204 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRAPPC6BQ86SZ2 158 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 PRSS35Q8N3Z0 413 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CD177Q8N6Q3 437 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 LRRC57Q8N9N7 239 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CCDC71LQ8N9Z2 235 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 DRAXINQ8NBI3 349 aaPredicted RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR4B1Q8NGF8 309 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR9G1Q8NH87 305 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CDC26Q8NHZ8 85 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 RASSF5Q8WWW0 418 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 CACNG8Q8WXS5 425 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF799Q96GE5 643 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 USMG5Q96IX5 58 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 AMELYQ99218 206 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 MICU1Q9BPX6 476 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ELAC2Q9BQ52 826 aaKnown RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 MRPL13Q9BYD1 178 aaKnown RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ACPTQ9BZG2 426 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 GFRA4Q9GZZ7 299 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 TLNRD1Q9H1K6 362 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 GAL3ST2Q9H3Q3 398 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 GOLPH3Q9H4A6 298 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 REEP4Q9H6H4 257 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 OPA3Q9H6K4 179 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF286AQ9HBT8 521 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 POLE3Q9NRF9 147 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 SLC2A9Q9NRM0 540 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM206AQ9NX38 181 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 SMPD3Q9NY59 655 aaPredicted RBP1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 RASL12Q9NYN1 266 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 RNF14Q9UBS8 474 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 SPATA2Q9UM82 520 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 WDR45Q9Y484 360 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 UGT2A1Q9Y4X1 527 aa1.33□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 A0A087X0M5 115 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGHV1-3A0A0C4DH29 117 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZCWPW2A0A1B0GU75 182 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 A0A1B0GX30 115 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 PRAC2D3DTV9 90 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 LOC110117498-PIK3R3F6TDL0 507 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 CXCR6O00574 342 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 RNF13O43567 381 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 PSTPIP1O43586 416 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SPOPO43791 374 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 IDH3BO43837 385 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 GGCTO75223 188 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SEC22BO75396 215 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SLC2A10O95528 541 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGLV3-1P01715 115 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 GIG44P09565 113 aaPredicted RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SPP1P10451 314 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ACADSP16219 412 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 HOXB9P17482 250 aaPredicted RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 GABRB3P28472 473 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 DDOSTP39656 456 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 VHLP40337 213 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 CETN2P41208 172 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ALDH18A1P54886 795 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SEC61BP60468 96 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ATP6V0D1P61421 351 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 DIAPH2-AS1Q14236 149 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ENDOGQ14249 297 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 MMDQ15546 238 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF79Q15937 498 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SMIM21Q3B7S5 101 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SPIN4Q56A73 249 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM209BQ5JX69 171 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 PRAMEF5Q5TYX0 476 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 AGBL2Q5U5Z8 902 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 C16orf62Q7Z3J2 963 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 PPP1R27Q86WC6 154 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 GPHB5Q86YW7 130 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 STHQ8IWL8 128 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 C10orf53Q8N6V4 93 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZBTB34Q8NCN2 500 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 CSNK1G2-AS1Q8NCQ2 148 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 LFNGQ8NES3 379 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 NOXO1Q8NFA2 376 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 DMBX1Q8NFW5 382 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR4F6Q8NGB9 312 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR4D6Q8NGJ1 314 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR2AJ1Q8NGZ0 328 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM76AQ8TAV0 307 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF671Q8TAW3 534 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 STAG3L4Q8TBR4 150 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 ANKRD49Q8WVL7 239 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 SELENOMQ8WWX9 145 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 GGHQ92820 318 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 RPL3LQ92901 407 aaKnown RBP1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM19Q96HH6 336 aa1.32□□□□□ -2.2
TRAV1-1-201ENST00000542354 TSSK3Q96PN8 268 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms