RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 FASP25445 335 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 DGCR2P98153 550 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 BNIP1Q12981 228 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 MADCAM1Q13477 382 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 PAN3Q58A45 887 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 Q8N6K4 173 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 CNIH3Q8TBE1 160 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 GPR61Q9BZJ8 451 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 ZCCHC4Q9H5U6 513 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 ISG20L2Q9H9L3 353 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 ZFP57Q9NU63 452 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 AMMECR1Q9Y4X0 333 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 DAPL1A0PJW8 107 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 ZNF736B4DX44 427 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 GABRPO00591 440 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 HCKP08631 526 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 OCM2P0CE71 109 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 OCMP0CE72 109 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 GPR12P47775 334 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 CCR9P51686 369 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 TMED1Q13445 227 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 Q8N9W7 124 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 RGP1Q92546 391 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 PDCD1LG2Q9BQ51 273 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 DCLRE1BQ9H816 532 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 SCOCQ9UIL1 159 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 AP4S1Q9Y587 144 aa12.12□□□□□ -0.47
CLSTN3-213ENST00000541953 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 HSD17B6O14756 317 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 SULT1B1O43704 296 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 ZFPL1O95159 310 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 MTNR1BP49286 362 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 CFHR3Q02985 330 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 EBI3Q14213 229 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 ELP2Q6IA86 826 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 LHFPL3Q86UP9 236 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 OR8H3Q8N146 312 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 RFKQ969G6 155 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 LGALS12Q96DT0 336 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 HSPB9Q9BQS6 159 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 PCDHB16Q9NRJ7 776 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
CLSTN3-213ENST00000541953 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 SLC31A2O15432 143 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 RAB7AP51149 207 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 ZNF816Q0VGE8 651 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 TMEM104Q8NE00 496 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 OR10X1Q8NGY0 326 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 ABCG5Q9H222 651 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 RHOFQ9HBH0 211 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 GAR1Q9NY12 217 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 ENOPH1Q9UHY7 261 aa12.1□□□□□ -0.47
CLSTN3-213ENST00000541953 BIRC6Q9NR09 4857 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 C15orf65H3BRN8 121 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 CDRT1O95170 752 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 C21orf33P30042 268 aaPredicted RBP12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 SLC6A1P30531 599 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 SLC35B1P78383 322 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 PAX5Q02548 391 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 ASPHD1Q5U4P2 390 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 ZNF529Q6P280 563 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 KCTD20Q7Z5Y7 419 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 FOXRED2Q8IWF2 684 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 IZUMO1Q8IYV9 350 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 ZNF565Q8N9K5 539 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 SUMF2Q8NBJ7 301 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 HAVCR2Q8TDQ0 301 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 TNFAIP8L1Q8WVP5 186 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 ALG8Q9BVK2 526 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 TAS2R4Q9NYW5 299 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 EXOGQ9Y2C4 368 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 HYDINQ4G0P3 5121 aa12.09□□□□□ -0.47
CLSTN3-213ENST00000541953 A0A1W2PP11 408 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 NCBP2LA6PVI3 153 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 CCRL2O00421 344 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 DBTP11182 482 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 GABRB1P18505 474 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 ECI1P42126 302 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 GTF2A1P52655 376 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 GPR50Q13585 617 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 IL13RA2Q14627 380 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 ZIK1Q3SY52 487 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 XAF1Q6GPH4 301 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 UNQ9370/PRO34162Q6UXP9 181 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 ACBD7Q8N6N7 88 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 RNF152Q8N8N0 203 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 PXT1Q8NFP0 134 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 ST6GALNAC6Q969X2 333 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
CLSTN3-213ENST00000541953 CENPNQ96H22 339 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms