RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 CD80P33681 288 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 RAB5CP51148 216 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 FLI1Q01543 452 aaPredicted RBP11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 HES3Q5TGS1 186 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 CBLN2Q8IUK8 224 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 OR10Z1Q8NGY1 313 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 KIRREL1Q96J84 757 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 C12orf49Q9H741 205 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 GP6Q9HCN6 339 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 LUZP4Q9P127 313 aa11.32□□□□□ -0.6
PRKAB1-206ENST00000541640 HSPB6O14558 160 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 SLC34A2O95436 690 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 HEXAP06865 529 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 NKX2-1P43699 371 aaPredicted RBP11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 FAM76BQ5HYJ3 339 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF880Q6PDB4 577 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 FAM58AQ8N1B3 248 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 OR2C3Q8N628 320 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 STRAPQ9Y3F4 350 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 MED13Q9UHV7 2174 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 C9JQL5 133 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 H7C2Y5 167 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 TSPAN15O95858 294 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 SNCAP37840 140 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 CTAG1AP78358 180 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 MDP1Q86V88 176 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 IL22RA2Q969J5 263 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF488Q96MN9 340 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 DEFB127Q9H1M4 99 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 OR51I2Q9H344 312 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 CCL28Q9NRJ3 127 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 CACFD1Q9UGQ2 172 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF407Q9C0G0 2248 aa11.31□□□□□ -0.6
PRKAB1-206ENST00000541640 TRGV5A0A0B4J1U4 118 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 J3QW42 95 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 VDAC1P21796 283 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 LMO1P25800 156 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 MIDNQ504T8 468 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 NMSQ5H8A3 153 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 IL22RA1Q8N6P7 574 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 OR5D13Q8NGL4 314 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 SPRR3Q9UBC9 169 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 H0Y980 276 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 J3QT63 122 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 HSD17B6O14756 317 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 ADAM20O43506 726 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 CAMLGP49069 296 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 TGIF1Q15583 401 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 OR2T2Q6IF00 324 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 CABLES2Q9BTV7 478 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 PARP12Q9H0J9 701 aaKnown RBP11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 DLL3Q9NYJ7 618 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF175Q9Y473 711 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 KPTNQ9Y664 436 aa11.3□□□□□ -0.6
PRKAB1-206ENST00000541640 IGSF23A1L1A6 192 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 FAM24AA6NFZ4 105 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 HS3ST1O14792 307 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 PITX3O75364 302 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 MMP9P14780 707 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 CA6P23280 308 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 POLR2GP62487 172 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 HMGN3Q15651 99 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF766Q5HY98 468 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 RNFT1Q5M7Z0 435 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF324BQ6AW86 544 aaPredicted RBP11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 H1FOOQ8IZA3 346 aaPredicted RBP11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 LINC00518Q8N0U6 118 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 RDH5Q92781 318 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 SH3BGRL3Q9H299 93 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 PLEKHF2Q9H8W4 249 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 ZDHHC11Q9H8X9 412 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 PARD6AQ9NPB6 346 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 C19orf12Q9NSK7 152 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 PRELID3BQ9Y3B1 194 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 ARID1AO14497 2285 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 DNAJC13O75165 2243 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 RHBDL1O75783 438 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 ID3Q02535 119 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF616Q08AN1 781 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 ZNF266Q14584 549 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 TBC1D28Q2M2D7 210 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 C17orf78Q8N4C9 275 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 HSD17B11Q8NBQ5 300 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 SLC25A31Q9H0C2 315 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 OR51B6Q9H340 312 aa11.29□□□□□ -0.6
PRKAB1-206ENST00000541640 OR2W1Q9Y3N9 320 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms